Parental gene:

AZI2, ENSDNOG00000011053

Aliases:None
Description:5-azacytidine induced 2 [Source:HGNC Symbol;Acc:24002]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6642:182373..217161(-)


>ENSDNOG00000011053
ATGGATGAACTGGTAGAAGATGATATCTGCATTTTGAATCATGAAAAAGCCCATAGGAGGGATACAGTGACTCCAGTCTC
AATATACTCAGGAGATGAGTCTGTTGCTTCACATTTTGCCCTTGTCACTGCATATGAAGACATCAAAAAACGACTTAAAG
ATTCAGAAAAAGAGAACTCTTTCTTAAAAAAAAGAATAAGATTTTTGGAAGAAAAGCTTATTGGATCTCGATTAGATGAA
GAAACAAGTTCTGTGGGACGAGAACAAGTAAATAAGGCTTATCATGCATATCGAGAGGTCTGCATTGATAGAGATAATTT
AAAAAGCAAATTGGATAAAATGAATAAAGACAACTCTGAATCTTTGAAAGTATTGAATGAACAGCTGCAATCTAAAGAAG
TAGAACTCCTCCAGCTAAGGACAGAAGTGGAAACTCAGCAGGTGATGAGGAATTTAAATCCCCCTTCATCCGACTGGGAA
GTGGAAAAGTTGAGCTGTGACTTGAAGATCTATGGTTTGGAACAAGAGCTGGAACTGATGAGGAAAGAATGTAACGATCT
CAAAATAGAGCTACAAAAATCCAAACAAATGGATCTGTCTCAGGAAGATAATCTGAAGAGCAGAGATCTCCAAAGACTAA
ATATTTCAAGTGATAATATACAACAGGCATACTGGGAACTGAAGAGAGAAATGTCTAATTTACATTTGGTGACTCAAGTA
CAAGCTGAATTACTAAGAAAACTGAAAATCCCAACTGCAATCAAGAAAGCCTGTGCCCCAGTAGGATGTGTTGAAGACTT
TGGAAAAGATAACACAAAACTGCACTTGGCGAATTTTACTGCAACATATAAAAGATACACCCCTGTCTCACCAGATTGCA
AAGCACTTTGTCATACCACATCTTCCCCGATTCCAGGAGACATAAAGATATTACCCGAGAAACCAATTCTGCAATCATGG
ACAGATAATGAGAAATCCATTCCTAATGATGGCGCAAACTTTCAGGAAAACAACTCTTATGGCAGAAATTCCTTGGAAGA
TAATTCTTGGGTATTCCCAAGTCCGCCTAAATCAAGTGAGACAGCATTTGGGGAAATTAAAAGTAAAACTTTGCCTTTAC
CCAACTTGCCACCACTGCATTACTTGGATCACCATAATCAAAACTGCCTTTATAAGAATTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 44 .73 RPM
SRP012922_cerebellum 31 .89 RPM
SRP012922_heart 12 .99 RPM
SRP012922_kidney 21 .36 RPM
SRP012922_liver 16 .72 RPM
SRP012922_lung 28 .86 RPM
SRP012922_quadricep_muscle 36 .35 RPM
SRP012922_spleen 39 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010432 ortholog_one2one 2 retrogenes
retro_chof_1794, retro_chof_234,
Homo sapiens ENSG00000163512 ortholog_one2one 2 retrogenes
retro_hsap_1491, retro_hsap_1564,
Gorilla gorilla ENSGGOG00000022881 ortholog_one2one 2 retrogenes
retro_ggor_1145, retro_ggor_1189,
Loxodonta africana ENSLAFG00000008538 ortholog_one2one 2 retrogenes
retro_lafr_529, retro_lafr_925,
Myotis lucifugus ENSMLUG00000000043 ortholog_one2many 3 retrogenes
retro_mluc_1707, retro_mluc_435, retro_mluc_611,
Macaca mulatta ENSMMUG00000000056 ortholog_one2one 1 retrogene
retro_mmul_2135,
Monodelphis domestica ENSMODG00000015075 ortholog_one2one 1 retrogene
retro_mdom_1786,
Nomascus leucogenys ENSNLEG00000004069 ortholog_one2one 1 retrogene
retro_nleu_1714,
Oryctolagus cuniculus ENSOCUG00000014956 ortholog_one2many 1 retrogene
retro_ocun_1778,
Otolemur garnettii ENSOGAG00000005896 ortholog_one2many 1 retrogene
retro_ogar_3078,
Pongo abelii ENSPPYG00000014053 ortholog_one2one 2 retrogenes
retro_pabe_1241, retro_pabe_3784,
Pan troglodytes ENSPTRG00000014707 ortholog_one2one 1 retrogene
retro_ptro_1052,
Tursiops truncatus ENSTTRG00000016434 ortholog_one2one 1 retrogene
retro_ttru_1093,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_542 77.70 70.48
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2. retro_dnov_1377 76.43 65.39
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Download FASTA sequences of all ENSDNOG00000011053 retrocopies