Parental gene:

KLHL12, ENSDNOG00000010436

Aliases:None
Description:kelch-like family member 12 [Source:HGNC Symbol;Acc:19360]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6337:51107..122275(-)


>ENSDNOG00000010436
ATGGGAGGCATTATGGCCCCCAAAGACATAATGACAAATACTCATGCTAAATCCATCCTTAATTCAATGAACTCCCTCAG
GAAGAGCAATACCCTCTGTGATGTGACATTGAGAGTGGAGCAGAAAGACTTCCCCGCCCACCGGATTGTGCTGGCTGCCT
GTAGCGACTACTTCTGCGCCATGTTCACTAGTGAGCTTTCAGAAAAGGGGAAACCTTATGTTGATATCCAAGGTTTAACT
GCCTCTACCATGGAAATCCTGTTGGACTTTGTGTACACAGAAACAGTACATGTGACAGTGGAGAATGTACAAGAACTGCT
GCCTGCAGCCTGTCTGCTTCAGCTGAAAGGTGTGAAGCAAGCCTGCTGTGAGTTCTTAGAAAGTCAGTTGGACCCTTCTA
ATTGCCTGGGTATCAGGGATTTTGCTGAAACTCACAATTGTGTTGACCTGATGCAAGCAGCTGAGGTTTTTAGCCAGAAG
CATTTTCCTGAAGTTGTACAGCATGAAGAATTCATTCTTCTAAGTCAAGGAGAGGTGGAAAAGCTAATCAAGTGTGATGA
AATTCAGGTGGATTCTGAAGAGCCGGTCTTTGAGGCTGTCATCAATTGGGTGAAACATGCCAAGAAGGAGCGAGAAGAAT
CTTTGCCTGACCTACTACAGTATGTCCGAATGCCCTTGCTGACCCCTAGGTATATCACAGATGTAATAGATGCTGAGCCT
TTCATCCGCTGTAGTTTACAATGCAGGGACCTAGTTGATGAAGCAAAGAAGTTTCATCTGAGACCTGAACTGCGGAGTCA
GATGCAGGGACCCAGGACAAGGGCTCGTCTAGGAGCCAATGAAGTGCTTCTGGTAGTTGGGGGCTTTGGAAGTCAGCAGT
CTCCCATTGATGTGGTAGAGAAATATGATCCCAAAACTCAGGAGTGGAGCTTTTTGCCAAGCATCACTCGAAAGAGACGA
TATGTAGCCTCAGTGTCCCTACATGACCGGATCTACGTAATTGGTGGCTATGATGGCCGTTCTCGCCTTAGTTCAGTGGA
ATGTCTAGACTACACAGCAGATGAGGATGGAGTCTGGTATTCTGTGGCCCCTATGAATGTTCGACGAGGCCTAGCTGGAG
CTACCACCCTGGGAGATATGATCTATGTATCTGGAGGCTTTGATGGAAGCAGGCGTCACACCAGTATGGAGCGATATGAC
CCAAACATTGACCAGTGGAGCATGCTGGGAGATATGCAGACAGCCCGGGAAGGTGCCGGCCTTGTGGTGGCCAGTGGAGT
GATCTACTGTCTTGGAGGATATGATGGCTTAAATATATTAAATTCAGTTGAGAAGTATGATCCACATACAGGACACTGGA
CTAATGTTACGCCAATGGCCACCAAGCGCTCTGGTGCAGGAGTAGCCCTGCTAAATGACCATATTTATGTGGTGGGGGGA
TTTGATGGTACAGCCCACCTTTCTTCTGTTGAAGCATATAACATTCGTACAGACTCCTGGACAACTGTCACTAGTATGAC
CACCCCACGATGCTATGTAGGGGCTACAGTGCTTCGGGGGAGACTCTATGCAATTGCAGGATATGATGGGAATTCTCTGC
TGAGTAGCATTGAATGCTATGACCCCATCATCGACAGCTGGGAAGTAGTGACATCCATGGGAACTCAGCGCTGTGATGCC
GGTGTATGTGTTCTCCGAGAGAAGTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 35 .78 RPM
SRP012922_cerebellum 25 .98 RPM
SRP012922_heart 8 .82 RPM
SRP012922_kidney 22 .18 RPM
SRP012922_liver 7 .90 RPM
SRP012922_lung 18 .79 RPM
SRP012922_quadricep_muscle 13 .85 RPM
SRP012922_spleen 33 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006231 ortholog_one2one 1 retrogene
retro_cjac_2151,
Echinops telfairi ENSETEG00000007800 ortholog_one2one 2 retrogenes
retro_etel_2103, retro_etel_723,
Homo sapiens ENSG00000117153 ortholog_one2one 1 retrogene
retro_hsap_2545,
Macaca mulatta ENSMMUG00000017849 ortholog_one2one 1 retrogene
retro_mmul_612,
Nomascus leucogenys ENSNLEG00000018103 ortholog_one2one 1 retrogene
retro_nleu_2795,
Otolemur garnettii ENSOGAG00000014771 ortholog_one2one 1 retrogene
retro_ogar_1552,
Pongo abelii ENSPPYG00000000343 ortholog_one2one 1 retrogene
retro_pabe_1872,
Pan troglodytes ENSPTRG00000001861 ortholog_one2one 1 retrogene
retro_ptro_1483,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_2190 77.30 60.74
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Download FASTA sequences of all ENSDNOG00000010436 retrocopies