Parental gene:

TRNT1, ENSDNOG00000008837

Aliases:None
Description:tRNA nucleotidyl transferase, CCA-adding, 1 [Source:HGNC Symbol;Acc:17341]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_589:1556..47848(+)


>ENSDNOG00000008837
ATGTTGAGGTACCTGTCTACTTGGCATAGGCCGTTACTAAATTGTAGTTGGAGTAGACTGTGCTTTCTGAAGCAGTGTCT
ATTTACAATGAAGTTGGAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCTTCATGAAGAAAATTTTGAAATTACTACACTCCGGATTGATGTCACCACTGATGGAA
GACATGCTGAGGTAGAATTCACAACTGACTGGCAGAAAGATGCTGAGCGCAGAGATCTCACTATAAATTCTATGTTTTTA
GGTTTTGATGGTACCTTATTTGACTACTTTAATGGTTATGAAGATTTAAAAAACAAGAAAGTTAGATTTGTTGGACATGC
TAAACAGAGAATTCAAGAGGATTATCTTCGAATTTTAAGGTATTTCAGGTTTTATGGGAGAATTGTAGAAAAACCTGGTG
ACCATGATCCTGAGACTTTAGAAGCAATTGCTGAAAATGCAAAAGGATTGGCTGGAATATCAGGAGAGAGGATTTGGGTG
GAACTGAGAAAAATTCTTGTTGGTAACCATGTAAATCACTTGATTCATCTTATGTATGATCTTGATGTGGCTCCTTACAT
AGGTCTACCTGCTAATGCAAATTTGGAAGAATTTGACAAAGTCTGTAAATATGCTGAAGGCTTTTCACCAAAGCCAATGA
CAGTCTTGGCCTCATTATTCAAAGTACAGGATGATGTCATAAAATTGGATTTGAGGTTGAAGATTTCAAGAGAAGAGAAA
AACCTTGGCTTATTTATAGTTAAAAATAGGAAGGATTTAATTAAAGCAACAGATAGTTCAGAACCATTAAAACCCTATAA
GGACTTCATTATAGATTCTAGGGAACCTGATGCGATTACTCGCGTATGTGAGCTACTGAAGTACCAAGGAGAGCATTGTC
TTCTAAAGGAAATGCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCA
GGAAAGGAAATCGGAGCTCTACTGCAACAGTTGCGAGAACAGTGGAAAAAAAGTGGTTACCAAATGGAAAAAGATGAACT
TTTGAGTTATGTAAAGAAGAACTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 19 .64 RPM
SRP012922_cerebellum 23 .92 RPM
SRP012922_heart 13 .92 RPM
SRP012922_kidney 14 .24 RPM
SRP012922_liver 13 .31 RPM
SRP012922_lung 18 .02 RPM
SRP012922_quadricep_muscle 12 .12 RPM
SRP012922_spleen 19 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015466 ortholog_one2one 1 retrogene
retro_cjac_1512,
Echinops telfairi ENSETEG00000018177 ortholog_one2one 2 retrogenes
retro_etel_1871, retro_etel_905,
Homo sapiens ENSG00000072756 ortholog_one2one 2 retrogenes
retro_hsap_246, retro_hsap_2598,
Gorilla gorilla ENSGGOG00000015286 ortholog_one2many 1 retrogene
retro_ggor_300,
Nomascus leucogenys ENSNLEG00000003226 ortholog_one2one 1 retrogene
retro_nleu_856,
Petromyzon marinus ENSPMAG00000002236 ortholog_one2one 1 retrogene
retro_pmar_17,
Pongo abelii ENSPPYG00000013702 ortholog_one2one 3 retrogenes
retro_pabe_1916, retro_pabe_2721, retro_pabe_412,
Pan troglodytes ENSPTRG00000014564 ortholog_one2one 1 retrogene
retro_ptro_1522,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1635 88.68 73.04
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Download FASTA sequences of all ENSDNOG00000008837 retrocopies