Parental gene:

BCCIP, ENSDNOG00000002939

Aliases:None
Description:BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:978]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6733:72407..120515(+)


>ENSDNOG00000002939
GAAGTGAATATTGAATTTGAAGCTTACTCCATCTCAGATAACGATTATGATGGAATTAAGAAATTACTACACCAGCTCTT
CCTAAAGGCTCCTGTGAATACTGCAGAACTAACAAATCTCTTAGTACAGCAGAACCACATTGGGAGTGTGATTAAGCAAA
CAGATGTTTCAGAAGACAGCGATGACGATGTGGAAGTTGATGAAGATGAGATTTTTGGTTTCATAAGTCTTTTAAATTTA
ACTGAACGAAAGGGTACCCAGTGTGCTGAACAAATTAAAGAGTTGATTCTAAGCTTCTGTGAGAAGAACTGTGAGAAGAG
CATGGTTGAACAGCTGGACAAGCTTTTAAATGACACCACCAAGCCTGTGGGCTTGCTGCTAAGTGAAAGATTCATTAATG
TCCCTCCGCAGATCGCCCTGCCCATGCACCAGCAACTTCAGAAAGAACTGGCTGAAGCACACAAAATGAACAAGCCATGT
GGGAAGTGTTGCTTCTACCTTATGATTAGTAAGACATTTGTGGAAGCAGGAAAAAACAATTCCAAAAAGAAATGGAGCAA
CCAAAAGAAAGATGAGCTCATGTTTGCAAATGCAGAGGAAGAATTTTTCTATGAGTGGGCACTCAGAGGTCCAGATGCGA
CAGGATTAGAACTGATCCTAACACAGCATAGCAATGTTTTCAGGGCTGTGATAGTGAATGGTGAACTAATTCAATCAAGG
TCAATTCAAACTGGTTCCAAGGGAACCTGCCTAATGGTTGGACTCCTGTCACAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 35 .78 RPM
SRP012922_cerebellum 23 .37 RPM
SRP012922_heart 21 .11 RPM
SRP012922_kidney 23 .27 RPM
SRP012922_liver 17 .18 RPM
SRP012922_lung 24 .74 RPM
SRP012922_quadricep_muscle 24 .58 RPM
SRP012922_spleen 34 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012873 ortholog_one2one 1 retrogene
retro_cfam_1356,
Callithrix jacchus ENSCJAG00000012411 ortholog_one2one 1 retrogene
retro_cjac_2838,
Macaca mulatta ENSMMUG00000008541 ortholog_one2one 1 retrogene
retro_mmul_472,
Oryctolagus cuniculus ENSOCUG00000008761 ortholog_one2one 1 retrogene
retro_ocun_843,
Otolemur garnettii ENSOGAG00000010901 ortholog_one2one 1 retrogene
retro_ogar_1184,
Ictidomys tridecemlineatus ENSSTOG00000011828 ortholog_one2one 4 retrogenes
retro_itri_1004, retro_itri_1130, retro_itri_1513, retro_itri_559,
Tupaia belangeri ENSTBEG00000002570 ortholog_one2one 4 retrogenes
retro_tbel_1259, retro_tbel_1260, retro_tbel_2963, retro_tbel_3044,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_530 78.36 66.28
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Download FASTA sequences of all ENSDNOG00000002939 retrocopies