Parental gene:

PAFAH1B3, ENSDNOG00000002870

Aliases:None
Description:platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) [Source:HGNC Symbol;Acc:8576]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1477:46310..48839(-)


>ENSDNOG00000002870
ATGAGGGGAGAGGAGAACCCAGCCAGCAAGCCCACGCCGGTGCAGGACGTGCAGGGCGACGGGCGCTGGATGTCCCTGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCACGTG
CTGTGGCGGCTGGAGAATGGAGATCATGAACACATCCGGCCCAAAATTGTGGTGGTCTGGGTGGGCACCAACAACCACGG
GCACACAGCAGAGCAGGTCACTGGCGGCATCGAGGCCATTGTACAACTGGTGAACCAGCGGCAGCCCCAGGCCCGGGTCG
TGGTGTTGGGCTTGCTCCCACGGGGCCAGCATCCCAACCCACTTCGAGAGAAGAACCAACAGGTCAACAAGCTGGTCCGG
GTGGCACTGGCTGGCCACCCAAGGGCACACTTCCTGGATGCTGATCCTGGCTTTGTGCACTCAGATGGCACCATAAGCCA
CCATGACATGTATGATTACCTGCACCTGAGCCGCCTGGGATACACACCCGTATGTCGGGCCCTGCACTCCCTGCTGCTGC
GTCTGCTGGCCCAAGACCAGGGCCAGGGCCCCCCACTGCCAGAGCCCACATCCTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 34 .81 RPM
SRP012922_cerebellum 38 .63 RPM
SRP012922_heart 4 .18 RPM
SRP012922_kidney 32 .31 RPM
SRP012922_liver 6 .50 RPM
SRP012922_lung 37 .11 RPM
SRP012922_quadricep_muscle 5 .54 RPM
SRP012922_spleen 27 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019787 ortholog_one2one 1 retrogene
retro_btau_547,
Canis familiaris ENSCAFG00000004847 ortholog_one2one 1 retrogene
retro_cfam_610,
Macaca mulatta ENSMMUG00000012172 ortholog_one2many 1 retrogene
retro_mmul_18,
Mustela putorius furo ENSMPUG00000007574 ortholog_one2one 1 retrogene
retro_mputfur_351,
Rattus norvegicus ENSRNOG00000020481 ortholog_one2one 1 retrogene
retro_rnor_976,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1276 63.38 61.04
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Download FASTA sequences of all ENSDNOG00000002870 retrocopies