Parental gene:

TMEM50A, ENSCPOG00000012615

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_25:10628038..10650820(-)


>ENSCPOG00000012615
ATGTCTGGATTTCTAGAAGGCATGAGATGCTCAGAATGCATTGATTGGGGAGAAAAGCGCAATACTATAGCTTCCATCGC
TGCTGGTATTCTGTTTTTCACAGGCTGGTGGATTATCATAGATGCAGCTGTTAATTATCCCAAAATGGAAGACTTCAACC
ACTCATACCATGCCTGTGGAGTGATAGCTACAATAGCCTTCCTAATGATAAATGCAGTATCGAATGGACAAGTTCGGGGT
GATAGTTACAGTGAAGGTTGTCTGGGTCAAACAGGTGCTCGCATTTGGCTGTTCATTGGTTTCATGCTGGCCTTCGGATC
TCTGATCGCATCTATGTGGATTCTGTTTGGAGGTTATGTTGCTAAAGAAAAACCCATAGTGTATCCTGGAATTGCTGTAT
TTTTTCAGAATGCCTTCATATTTTTTGGAGGACTGGTGTTTAAGTTTGGCCGCACTGAAGACTTGTGGCAG

Library Parental gene expression (RPM)
SRP017611_brain 21 .28 RPM
SRP017611_kidney 28 .06 RPM
SRP017611_liver 21 .42 RPM
SRP040447_lung 50 .42 RPM
SRP040447_skeletal_muscle 14 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018575 ortholog_one2one 1 retrogene
retro_cjac_1677,
Echinops telfairi ENSETEG00000007483 ortholog_one2one 1 retrogene
retro_etel_2061,
Macropus eugenii ENSMEUG00000002060 ortholog_one2one 1 retrogene
retro_meug_1270,
Macaca mulatta ENSMMUG00000032217 ortholog_one2one 1 retrogene
retro_mmul_1408,
Ochotona princeps ENSOPRG00000001182 ortholog_one2one 2 retrogenes
retro_opri_546, retro_opri_62,
Pongo abelii ENSPPYG00000001711 ortholog_one2one 1 retrogene
retro_pabe_1679,
Ictidomys tridecemlineatus ENSSTOG00000022246 ortholog_one2one 2 retrogenes
retro_itri_1228, retro_itri_1329,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_707 60.76 99.36
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Download FASTA sequences of all ENSCPOG00000012615 retrocopies