Parental gene: | SH3BGRL, ENSCPOG00000012267 |
| Aliases: | None |
| Description: | SH3 domain-binding glutamic acid-rich-like protein [Source:UniProtKB/TrEMBL;Acc:H0VL18] |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_26:16570938..16621340(-) |
>ENSCPOG00000012267
ATGGTGATCCGTGTATATATTGCATCTTCTTCTGGCTCCACGGCGATTAAGAAGAAACAGCAAGATGTGCTTGGTTTCTT
AGAAGCCAACAAAATAGGATTTGAAGAAAAAGATATTGCAGCCAATGAAGAGAATCGGAAGTGGATGAGAGAAAATGTAC
CTGAAAACAGTCGACCAGCCACAGGATATCCCTTGCCACCTCAGATTTTCAATGAAAGCCAGTACCGTGGGGACTATGAT
GCCTTCGAAGCTCGAGAAAATAATGCCGTGTATGCCTTTTTAGGCTTGAAGGCACCACCC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 12 .88 RPM |
| SRP017611_kidney | 33 .50 RPM |
| SRP017611_liver | 10 .19 RPM |
| SRP040447_lung | 40 .71 RPM |
| SRP040447_skeletal_muscle | 5 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004130 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003568 | ortholog_one2many | 2 retrogenes | |
| Equus caballus | ENSECAG00000012612 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013216 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_244 | 80.58 | 100.00 | Please wait, loading  |
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| 2. | retro_cpor_844 | 80.58 | 100.00 | Please wait, loading |
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| 3. | retro_cpor_1172 | 72.28 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000012267 retrocopies