Parental gene: | CHRAC1, ENSCPOG00000010427 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_17:36948796..36952312(-) |
>ENSCPOG00000010427
ATGGCGGACGTGGCCGTAGGCAAGGATAAATGCGGGGAGCAGCGGCTTGTCTCGCTGCCCTTGTCCCGTATCCGGGTCAT
CATGAAGAGTTCCCCCGAAGTGTCCAGCATCAACCAAGAGGCGCTGGTGCTCACGGCCAAGGCCACGGAGCTCTTTGTTC
AGTATCTAGCCACCTATTCCTACAGACATGGCAGTGGAAAAGAAAGGAAAGCACTGACTTACAGTGATTTAGCAAACACT
GCAGAGGAATCAGAAACTTTTCAGTTTCTTGCAGATATATTACCAAAGAAGATTTTAGCTAGTAAGTACCTGAAAATGCT
TAAGGAGAAGAGGGAAGATGATGAGGCGAATGATGGTGAGGAAAGTGATGATGATGAAGCCGAGTCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 4 .03 RPM |
| SRP017611_kidney | 4 .29 RPM |
| SRP017611_liver | 1 .22 RPM |
| SRP040447_lung | 7 .16 RPM |
| SRP040447_skeletal_muscle | 6 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005017 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000001188 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000756 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000008780 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000020621 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000008105 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_721 | 56.92 | 99.22 | Please wait, loading  |
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| 2. | retro_cpor_722 | 54.70 | 87.60 | Please wait, loading |
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| 3. | retro_cpor_723 | 54.55 | 100.00 | Please wait, loading |
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| 4. | retro_cpor_724 | 56.59 | 97.67 | Please wait, loading |
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| 5. | retro_cpor_1545 | 58.65 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000010427 retrocopies