Parental gene:

DDX41, ENSCPOG00000008770

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_17:23237190..23242250(-)


>ENSCPOG00000008770
CAGCGAGCTCGGGTCGACGAGACGTCTGCTGCAGGAAGCCGCTCTGAGGCTGAGGATGAGGACGACGAAGAATACGTACC
TTATGTACCATTGCGACAGCGCCGGCAACTACTGCTCCAGAAGCTGCTGCAACGAAGACGCAAAGGAGCTGCAGAAGAGG
AACAGCAGGACTGCAGCAGCGAGCCCCGGGGAGATGAGGACGATATCCCGCTGGGCCCTCAGTCCAATGTCAGTCTCCTG
GATCAGCACCAGCACCTCAAAGAGAAGGCTGAAGCCCGCAAGGAGTCTGCAAAGGAGAAGCAGTTGAAAGAAGAAGAGAA
GATTCTGGAGAGTGTGGCTGAGGGCCGAGCCCTGATGTCAGTGAAGGAGATGGCCAAAGGCATCACATATGATGACCCAA
TCAAAACCAGTTGGACCCCACCCCGTTATGTCCTGAGCATGTCTGAGGAGCGGCATGAGCGAGTACGGAAGAAGTACCAC
ATCCTGGTCGAAGGAGATGGTATCCCACCACCCATTAAGAGCTTCAAGGAAATGAAGTTTCCTGCAGCCATCCTTCGAGG
CTTGAAGAAAAAGGGCATTCTCCACCCAACACCCATCCAGATCCAGGGCATCCCCACCATTCTGTCTGGCCGAGACATGA
TTGGTATCGCCTTCACGGGGTCAGGCAAGACGCTTGTGTTCACGTTGCCTGTCATCATGTTCTGCCTTGAACAGGAGAAG
CGGTTGCCTTTCTCTAAGCGTGAAGGGCCCTATGGACTCATCATCTGCCCCTCACGGGAGCTGGCCCGGCAGACCCATGG
CATCCTGGAATATTACTGCCGCCTGCTACAGGAGGACAGCTCACCCCTCCTGCGCTGTGCTCTGTGCATTGGAGGGATGT
CCGTCAAAGAGCAGATGGAGACCATCCGACATGGTGTGCACATGATGGTGGCCACCCCTGGGCGCCTCATGGATTTGCTA
CAAAAGAAGATGGTCAGCCTCGACATCTGCCGCTACCTGGCCTTGGATGAGGCTGACCGCATGATCGATATGGGCTTTGA
GGGCGACATCCGTACCATCTTCTCCTACTTTAAGGGCCAGCGGCAGACTCTGCTCTTCAGTGCTACCATGCCTAAGAAGA
TTCAGAACTTTGCCAAGAGTGCCCTGGTAAAGCCTGTCACTATCAACGTGGGACGTGCTGGAGCTGCCAGCCTGGATGTC
ATACAGGAGGTGGAATATGTGAAGGAGGAAGCTAAGATGGTGTACCTGCTCGAGTGCCTGCAGAAGACTCCTCCACCTGT
GCTTATCTTTGCGGAGAAGAAGGCAGACGTCGATGCCATCCACGAGTACCTGCTGCTCAAGGGTGTCGAGGCTGTGGCCA
TCCATGGGGGCAAAGACCAGGAGGAACGGACCAAGGCCATTGAAGCATTTCGAGAGGGCAAGAAAGATGTCCTAGTGGCC
ACAGACGTTGCCTCTAAGGGCCTGGACTTTCCTGCCATCCAGCATGTCATCAATTACGACATGCCAGAGGAAATTGAGAA
TTACGTGCACCGGATCGGTCGTACTGGACGCTCAGGAAACACTGGCATTGCTACCACCTTCATCAACAAGGCTTGTGATG
AGTCCGTGCTGATGGACCTCAAGGCCCTACTATTAGAAGCTAAACAGAAGGTGCCACCAGTGCTGCAAGTACTGCACTGC
GGGGACGAGTCCATGCTGGATATCGGAGGAGAGCGTGGCTGTGCCTTCTGCGGGGGCCTTGGCCATCGGATCACTGACTG
TCCCAAACTGGAGGCCATGCAGACCAAGCAGGTCAGCAACATCGGCCGCAAGGACTACCTGGCCCACAGCTCTATGGACT
TC

Library Parental gene expression (RPM)
SRP017611_brain 22 .83 RPM
SRP017611_kidney 40 .20 RPM
SRP017611_liver 26 .77 RPM
SRP040447_lung 50 .92 RPM
SRP040447_skeletal_muscle 22 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Loxodonta africana ENSLAFG00000026418 ortholog_one2many 1 retrogene
retro_lafr_689,
Macropus eugenii ENSMEUG00000014375 ortholog_one2many 1 retrogene
retro_meug_2040,
Otolemur garnettii ENSOGAG00000011123 ortholog_many2many 1 retrogene
retro_ogar_1801,
Rattus norvegicus ENSRNOG00000012771 ortholog_one2many 1 retrogene
retro_rnor_2396,
Sarcophilus harrisii ENSSHAG00000014005 ortholog_many2many 1 retrogene
retro_shar_53,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1521 59.13 73.94
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Download FASTA sequences of all ENSCPOG00000008770 retrocopies