Parental gene:

MRPS18A, ENSCJAG00000017382

Aliases:None
Description:mitochondrial ribosomal protein S18A [Source:HGNC Symbol;Acc:14515]
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:45010363..45031113(-)


>ENSCJAG00000017382
ATGGCGGCCTTTAAGATTCTGTTGTCCGGCAGTGAGCAGCTTCTCCGTGGGCTCCTAGCGGGCACGGCAGCTACCAGCTG
GTCTCGGCTTCCAGCTCGCGGGTTCAGGGAAGTGGTGGAGATCCAAGAAGGGAAGACAACTATAATTGAAGGCCGTATCA
CAGTGACTCCCAAGGAGACTCCAAATCCTCCTAACCCCTCTGGCCAGTGCCCCATCTGCCGTTGGAACCTGAAGCACAAG
TATAACTATGACGATGTTCTGCTGCTTAGCCAGTTCATCCGGCCTCATGGAGGCATGCTACCCCGAAAGATCACAGGCCT
GTGCAGGGAAGAACACCGAAAGATCGAGGAGTGTGTGAAGATGGCCCACCGAGCAGGTAGAAGGCCCTCAGGACCAAGAG
GGGTAGAGGGCTGCAGGAGCTCTCTCCCCACCCAGCTGCCCCATGTTTTGGCCCCTCCTGGAAGAAAATTGGATATCCAG
AGTGTTAATTACACTCACTGCCCAATGCCAACCTCCCCGCTCCCTTGGGCTTTCTCTCTGGCCCCCTTAGAGCTGCAGAG
GGAACTGCAAAGACTGTCCCCTCTTCCCCACTCAGGTCTGTTACCAAATCACAGGCCTCGGCTTCCTGAAGGAGTTGTTC
CGAAGAACAAACCCCAGCTCAACCGGTACCTGACGCGCTGGGCTCCCAAGTCCGTCAAGCCCATCTACAAAAAAGGCCCC
CGCTGGAACAGGGTGCTCATGCCCGTGGGGTCACCCCTCCTGAGGGACAATGTCTGCTACTCAAGAACACCTTGGAAGCT
GTATCACTGA

Library Parental gene expression (RPM)
SRP051959_colon 12 .56 RPM
SRP051959_heart 13 .35 RPM
SRP051959_kidney 15 .35 RPM
SRP051959_liver 12 .69 RPM
SRP051959_lung 11 .50 RPM
SRP051959_lymph_node 9 .38 RPM
SRP051959_skeletal_muscle 15 .37 RPM
SRP051959_spleen 13 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000096080 ortholog_one2one 1 retrogene
retro_hsap_2787,
Macropus eugenii ENSMEUG00000013986 ortholog_one2one 1 retrogene
retro_meug_1966,
Pongo abelii ENSPPYG00000017282 ortholog_one2one 1 retrogene
retro_pabe_2230,
Pan troglodytes ENSPTRG00000018209 ortholog_one2one 1 retrogene
retro_ptro_1888,
Tarsius syrichta ENSTSYG00000001390 ortholog_one2one 1 retrogene
retro_tsyr_862,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1386 77.04 98.47
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Download FASTA sequences of all ENSCJAG00000017382 retrocopies