Parental gene:

PPP2CB, ENSCJAG00000012460

Aliases:None
Description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:F6XZ20]
Organism:Marmoset (Callithrix jacchus)
Coordinates:13:28769718..28799012(-)


>ENSCJAG00000012460
ATGGACGACAAGGCGTTCACCAAGGAGCTGGACCAGTGGGTCGAGCAGCTGAACGAGTGTAAGCAGCTGAACGAGAACCA
AGTGCGGACGCTGTGCGAGAAGGCAAAGGAAATTTTAACAAAAGAATCAAATGTGCAAGAGGTTCGTTGCCCAGTTACGG
TCTGTGGAGATGTGCATGGTCAATTTCATGATCTTATGGAACTCTTTAGAATTGGTGGAAAATCACCAGATACAAACTAC
TTATTCATGGGTGACTATGTAGACAGAGGATATTATTCAGTGGAGACTGTGACTCTTCTTGTAGCATTAAAGGTGCGTTA
TCCAGAACGCATTACAATATTGAGAGGAAATCACGAAAGCCGACAAATTACTCAAGTATATGGCTTTTATGATGAATGTC
TGCGAAAGTATGGGAATGCCAATGTTTGGAAATATTTTACAGATCTCTTTGATTATCTTCCACTTACAGCTTTAGTAGAT
GGACAGATATTCTGCCTCCATGGTGGCCTCTCTCCATCCATAGACACACTGGATCATATAAGAGCCCTGGATCGTTTACA
GGAAGTTCCTCATGAGGGCCCAATGTGTGATCTGTTATGGTCAGATCCAGATGATCGTGGTGGATGGGGTATTTCACCAC
GTGGTGCTGGCTACACATTTGGACAAGACATTTCTGAAACCTTTAACCATGCCAATGGTCTCACACTGGTTTCTCGTGCC
CACCAGCTTGTAATGGAGGGATACAATTGGTGTCATGATCGGAATGTGGTTACCATTTTCAGTGCACCCAATTACTGTTA
TCGTTGTGGGAACCAGGCTGCTATCATGGAATTAGATGACACTTTAAAATATTCCTTCCTTCAGTTTGACCCAGCGCCCC
GTCGTGGCGAGCCTCATGTTACACGGCGCACCCCAGACTACTTCCTATAA

Library Parental gene expression (RPM)
SRP051959_colon 29 .60 RPM
SRP051959_heart 22 .52 RPM
SRP051959_kidney 33 .12 RPM
SRP051959_liver 9 .55 RPM
SRP051959_lung 24 .82 RPM
SRP051959_lymph_node 10 .30 RPM
SRP051959_skeletal_muscle 11 .31 RPM
SRP051959_spleen 17 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013634 within_species_paralog 2 retrogenes
retro_cjac_1346, retro_cjac_4113,
Dasypus novemcinctus ENSDNOG00000010906 ortholog_one2one 1 retrogene
retro_dnov_2211,
Homo sapiens ENSG00000104695 ortholog_one2one 1 retrogene
retro_hsap_1631,
Gorilla gorilla ENSGGOG00000013978 ortholog_one2one 1 retrogene
retro_ggor_380,
Macaca mulatta ENSMMUG00000020819 ortholog_one2one 1 retrogene
retro_mmul_484,
Monodelphis domestica ENSMODG00000019001 ortholog_one2many 2 retrogenes
retro_mdom_192, retro_mdom_632,
Oryctolagus cuniculus ENSOCUG00000005230 ortholog_one2one 1 retrogene
retro_ocun_1697,
Pongo abelii ENSPPYG00000018491 ortholog_one2one 1 retrogene
retro_pabe_335,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_985 93.20 66.67
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Download FASTA sequences of all ENSCJAG00000012460 retrocopies