Parental gene:

CDK16, ENSCJAG00000012261

Aliases:None
Description:cyclin-dependent kinase 16 [Source:HGNC Symbol;Acc:8749]
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:46187975..46193307(+)


>ENSCJAG00000012261
ATCGCCATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTAGCCGAAACATAGACAAGACCAA
TGGTGCCACTGAGCAGATAGGCCTGGATGAGAGTGGTGGTGGTGGTGGTGGCAGTGACCCTGGAGAGGCCCCCACACGTG
CTGCTCCTGGGGAACTTCGCTCTGCACGGGGCCCACTCAGCTCTGCACCAGAGATTGTGCACGAGGACTTGAAGATGGGG
TCTGATGGGGAGAGTGACCAGGCTTCAGCCACATCCTCGGATGAGGTGCAGTCTCCAGTGAGAGTGCGCATGCGCAACCA
TCCCCCACGCAAGATCTCCACTGAGGACATCAACAAACGCCTATCGCTACCAGCTGACATCCGGCTACCTGAGGGCTACC
TTGAGAAGCTGACCCTCAATAGTCCCATCTTTGACAAGCCACTCAGCCGCCGCCTCCGTCGTGTCAGCCTGTCTGAGATT
GGCTTTGGGAAACTGGAGACTTACATTAAGCTGGACAAGCTGGGCGAGGGTACCTATGCCACCGTCTACAAAGGCAAAAG
CAAGCTCACAGACAACCTTGTGGCGCTCAAGGAGATCAGACTGGAACATGAAGAGGGGGCACCGTGCACCGCCATCCGGG
AAGTGTCTCTGCTCAAGGACCTCAAACACGCCAACATTGTTACGCTACATGACATTATCCACACGGAGAAGTCCCTCACC
CTTGTCTTTGAGTACCTGGACAAGGACCTGAAGCAGTACCTGGATGATTGTGGGAACATCATCAACATGCACAACGTGAA
ACTGTTCCTGTTCCAGCTGCTCCGTGGCCTGCCCTACTGCCACCGGCAGAAGGTGCTACACCGAGACCTCAAGCCCCAGA
ACCTGCTCATCAACGAGAGAGGAGAGCTCAAGCTGGCTGACTTTGGTCTGGCCCGGGCCAAGTCAATCCCAACAAAGACG
TACTCCAATGAGGTGGTGACACTGTGGTACCGTCCCCCTGACATCCTGCTTGGGTCCACAGACTACTCCACTCAGATTGA
CATGTGGGGTGTGGGCTGCATCTTCTATGAGATGGCCACAGGCCGGCCCCTCTTCCCCGGCTCCACGGTGGAGGAACAAC
TGCATTTCATCTTCCGCATCTTAGGAACCCCAACTGAGGAGACTTGGCCAGGCATCCTGTCCAATGAGGAGTTCAAGACC
TACAACTACCCCAAGTACCGAGCTGAGGCCCTTTTGAGCCACGCACCCCGACTTGATAGTGACGGGGCTGACCTCCTTAC
CAAGCTGCTGCAGTTTGAGGGTCGAAATCGGATCTCCGCAGAGGATGCCATGAAACATCCATTCTTCCTCAGTCTGGGGG
AGCGGATCCACAAACTTCCTGACACTACTTCCATATTTGCACTAAAGGAGATTCAGCTACAAAAGGAGGCCAGCCTTCGG
TCTTCATCAATGCCTGACTCAGGCAGGCCAGCTTTCCGCGTGGTGGACACCGAGTTCTAA

Library Parental gene expression (RPM)
SRP051959_colon 8 .28 RPM
SRP051959_heart 13 .40 RPM
SRP051959_kidney 10 .32 RPM
SRP051959_liver 4 .07 RPM
SRP051959_lung 8 .28 RPM
SRP051959_lymph_node 7 .81 RPM
SRP051959_skeletal_muscle 18 .96 RPM
SRP051959_spleen 7 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006697 other_paralog 3 retrogenes
retro_cjac_2163, retro_cjac_2891, retro_cjac_2951,
Callithrix jacchus ENSCJAG00000007001 other_paralog 2 retrogenes
retro_cjac_1846, retro_cjac_671,
Callithrix jacchus ENSCJAG00000014175 within_species_paralog 1 retrogene
retro_cjac_4070,
Callithrix jacchus ENSCJAG00000020258 within_species_paralog 1 retrogene
retro_cjac_1522,
Dipodomys ordii ENSDORG00000002798 ortholog_one2one 1 retrogene
retro_dord_501,
Echinops telfairi ENSETEG00000003242 ortholog_one2one 1 retrogene
retro_etel_2002,
Myotis lucifugus ENSMLUG00000013128 ortholog_one2many 1 retrogene
retro_mluc_209,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_961 85.63 99.80
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Download FASTA sequences of all ENSCJAG00000012261 retrocopies