Parental gene:

BCAP31, ENSCJAG00000011348

Aliases:None
Description:B-cell receptor-associated protein 31 [Source:HGNC Symbol;Acc:16695]
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:140230557..140257185(-)


>ENSCJAG00000011348
ATGAGTCTGCAGTGGACTGCAGTTGCCACCTTCCTCTATGCGGAAGTCTTTGTGGTGTTGCTTCTCTGCATTCCTTTCAT
TTCTCCTAAAAGGTGGCAGAAAATTTTCAAATCCCGGCTGGTGGAGTTGGTAGTATCCTATGGCAACACCTTCTTTGTGG
TTCTAATTGTCATCCTTGTGCTGTTGGTCATTGATGCCGTGCGCGAGATTCGAAAGTACGATGATGTGACTGAAAAGGTG
AACCTCCAGAACAATCCTGGAGCCATGGAACACTTCCACATGAAGCTTTTCCGTGCCCAGAGGAATCTCTACATTGCTGG
CTTTTCCTTGCTGCTGTCCTTCCTGCTTAGACGCCTGGTGACTCTCATCTCACAGCAGGCCACACTGCTGGCCTCCAATG
AAGCCTTTAAAAAGCAGGCGGAGAGCGCTAGTGAGGCAGCCAAGAAGTACATGGAGGAGAATGACCAGCTCAAGAAGGGA
GCTGCTGTTGATGGAGGCAAGTTAGATGTCGGGAATGCTGAGGTGAAGTTGGAGGAAGAGAACAGAAGCCTGAAGGCTGA
CCTGCAGAAGCTAAAGGACGAGCTGGCCAGCACGAAGCAAAAACTAGAGAAAGCTGAAAACCAGGCTCTGGCCATGCGGA
AGCAGTCCGAGGGTCTCACCAAGGAGTATGACCGCCTGCTGGAGGAGCACGCAAAGCTGCAGTCCATGGTTTGTGGCCCC
ATCAAGAACAGAAGCAGGTGA

Library Parental gene expression (RPM)
SRP051959_colon 21 .19 RPM
SRP051959_heart 15 .08 RPM
SRP051959_kidney 27 .51 RPM
SRP051959_liver 24 .76 RPM
SRP051959_lung 16 .97 RPM
SRP051959_lymph_node 14 .20 RPM
SRP051959_skeletal_muscle 9 .32 RPM
SRP051959_spleen 22 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000019245 ortholog_one2one 1 retrogene
retro_cfam_482,
Callithrix jacchus ENSCJAG00000016329 within_species_paralog 1 retrogene
retro_cjac_2669,
Echinops telfairi ENSETEG00000008662 ortholog_one2one 1 retrogene
retro_etel_1522,
Macropus eugenii ENSMEUG00000007345 ortholog_one2one 3 retrogenes
retro_meug_1017, retro_meug_1867, retro_meug_208,
Monodelphis domestica ENSMODG00000008300 ortholog_one2many 2 retrogenes
retro_mdom_1110, retro_mdom_24,
Sarcophilus harrisii ENSSHAG00000009111 ortholog_one2many 1 retrogene
retro_shar_31,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2552 79.53 71.19
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Download FASTA sequences of all ENSCJAG00000011348 retrocopies