Parental gene:

ENSCJAG00000007306

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:79019773..79034516(-)


>ENSCJAG00000007306
ATGGCGTTCACGTTCGCGGCCTTCTGCTACATGCTAGCGCTGCTGCTCACCGCCGCGCTCATCTTCTTCGCCATTTGGCA
CATTATAGCATTTGATGAGCTGAAGACTGATTACAAGAATCCTATAGACCAGTGTAATACCCTGAATCCTCTTGTACTCC
CAGAGTACCTCATCCATGCTTTCTTCTGTGTCATGTTTCTTTGTGCAGCAGAGTGGCTTACGCTGGGTCTCAATATGCCC
CTCTTGGCATATCATATTTGGAGGTATATGAGTAGACCAGTGATGAGTGGACCAGGACTGTATGATCCTACAACCATCAT
GAATGCAGATATTCTAGCATATTGTCAGAAGGAAGGATGGTGTAAATTAGCTTTTTATCTTCTAGCATTTTTTTACTACC
TATACGGCATGATCTATGTTTTGGTGAGCTCTTAG

Library Parental gene expression (RPM)
SRP051959_colon 6 .81 RPM
SRP051959_heart 7 .23 RPM
SRP051959_kidney 5 .70 RPM
SRP051959_liver 7 .95 RPM
SRP051959_lung 6 .47 RPM
SRP051959_lymph_node 6 .44 RPM
SRP051959_skeletal_muscle 4 .80 RPM
SRP051959_spleen 6 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000031178 ortholog_one2many 2 retrogenes
retro_cfam_658, retro_cfam_697,
Callithrix jacchus ENSCJAG00000008013 within_species_paralog 1 retrogene
retro_cjac_2474,
Equus caballus ENSECAG00000026814 ortholog_one2many 1 retrogene
retro_ecab_685,
Loxodonta africana ENSLAFG00000014841 ortholog_one2many 1 retrogene
retro_lafr_963,
Nomascus leucogenys ENSNLEG00000012704 ortholog_one2many 1 retrogene
retro_nleu_1896,
Otolemur garnettii ENSOGAG00000024582 ortholog_one2many 1 retrogene
retro_ogar_2271,
Ochotona princeps ENSOPRG00000005287 ortholog_one2many 4 retrogenes
retro_opri_198, retro_opri_269, retro_opri_366, retro_opri_894,
Tupaia belangeri ENSTBEG00000010265 ortholog_one2many 3 retrogenes
retro_tbel_2080, retro_tbel_3728, retro_tbel_572,
Tarsius syrichta ENSTSYG00000011295 ortholog_one2many 1 retrogene
retro_tsyr_1540,
Tursiops truncatus ENSTTRG00000008259 ortholog_one2many 1 retrogene
retro_ttru_261,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_103 97.92 100.00
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Download FASTA sequences of all ENSCJAG00000007306 retrocopies