Parental gene: | EHD1, ENSCJAG00000002660 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 11:120465882..120494178(-) |
>ENSCJAG00000002660
ATGTTCAGCTGGGTCAGCAAGGATGCCCGCCGCAAGAAGGAGCCGGAGCTCTTCCAGACGGTGGCCGAGGGGCTGCGGCA
GCTGTACGCGCAGAAGCTGCTGCCCCTGGAGGAGCACTACCGCTTCCACGAGTTCCACTCGCCCGCGCTGGAGGACGCTG
ACTTCGACAACAAGCCCATGGTGCTCCTGGTGGGCCAGTACAGCACTGGCAAGACCACCTTCATCCGGCACCTGATCGAG
CAGGACTTCCCGGGGATGCGCATCGGGCCCGAGCCCACCACCGACTCCTTCATCGCCGTCATGCACGGCCCCACCGAGGG
CGTGGTGCCGGGTAACGCGCTCGTGGTGGACCCGCGGCGCCCCTTCCGCAAGCTCAACGCCTTCGGCAACGCTTTCCTCA
ACAGGTTCATGTGTGCCCAGCTGCCCAACCCCGTCCTGGACAGCATCAGTATCATCGACACCCCCGGGATCCTGTCCGGA
GAGAAGCAGCGCATCAGCAGAGGCTATGACTTTGCAGCTGTCCTGGAGTGGTTCGCCGAGCGGGTGGACCGCATCATCCT
GCTCTTCGATGCCCATAAGCTGGACATCTCTGATGAGTTCTCGGAAGTGATCAAGGCTCTGAAGAACCACGAGGACAAGA
TCCGCGTGGTATTGAACAAGGCAGACCAGATCGAGACGCAGCAGCTGATGCGGGTGTACGGGGCCCTCATGTGGTCCCTG
GGCAAGATCATCAACACCCCTGAGGTGGTCAGAGTCTACATCGGCTCCTTTTGGTCCCACCCGCTCCTCATCCCCGACAA
CCGCAAGCTCTTTGAGGCCGAGGAGCAGGACCTCTTCAAGGACATCCAGTCTCTGCCCCGAAACGCTGCCCTCAGGAAGC
TCAATGACCTGATCAAGCGGGCGCGGCTGGCCAAGGTTCATGCCTACATCATCAGCTCCCTCAAGAAGGAGATGCCCAAT
GTCTTTGGGAAAGAGAGCAAAAAGAAAGAGCTGGTGAACAACCTGGGAGAGATCTACCAGAAGATCGAGCGTGAGCACCA
GATCTCCCCCGGTGACTTCCCAAGCCTCCGCAAGATGCAGGAACTCCTGCAGACTCAGGACTTCAACAAGTTCCAGGCCC
TGAAGCCCAAGCTGCTGGACACGGTGGACGACATGCTGGCCAACGACATCGCACGGCTGATGGTGATGGTGCGGCAGGAG
GAGTCCCTGATGCCTTCCCAGGTGGTCAAGGGCGGCGCCTTTGATGGTACCATGAACGGGCCCTTCGGGCACGGCTACGG
TGAGGGGGCCGGCGAGGGCATTGATGACGTCGAGTGGGTGGTGGGCAAAGACAAGCCCACCTATGACGAGATCTTCTACA
CACTGTCCCCCGTCAACGGCAAGATCACGGGCGCCAACGCCAAGAAGGAGATGGTGAAGTCCAAGCTACCCAACACCGTG
CTGGGGAAGATCTGGAAGCTGGCAGACGTGGACAGGGACGGGCTGCTGGACGACGAGGAGTTTGCGCTGGCCAACCACCT
CATCAAAGTCAAGCTGGAGGGCCACGAGCTGCCTGCCGACCTGCCCCCGCACCTGGTGCCGCCCTCCAAACGCAGGCACG
AGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 26 .49 RPM |
| SRP051959_heart | 16 .21 RPM |
| SRP051959_kidney | 25 .80 RPM |
| SRP051959_liver | 8 .53 RPM |
| SRP051959_lung | 22 .04 RPM |
| SRP051959_lymph_node | 29 .02 RPM |
| SRP051959_skeletal_muscle | 20 .94 RPM |
| SRP051959_spleen | 19 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014128 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007772 | other_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013985 | other_paralog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000005706 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_559 | 83.81 | 54.31 | Please wait, loading  |
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Download FASTA sequences of all ENSCJAG00000002660 retrocopies