Parental gene: | ORC3, ENSCJAG00000000730 |
| Aliases: | ORC3, ORC3L |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:86599035..86762314(+) |
>ENSCJAG00000000730
ATGGCCACCTCGTCGGTGTCTAAGGGCTGCTTTGTTTTTAAGCCAAACTCCAAAAAGAGAAAGATCTCTGTGCCAATAGA
GGATTATTTTAACAAAGGGAAAAGTGAGTCTGAGGACAGTAAGCTTCGATTCGAAACTTATCAGTTGTTATGGCAGCAGA
TGAAATCTGAAAATGAGCGACTACAAGAGGATTTAAATAAAAACTTGTTTGACAATCTAATTGAATTTCTGAAAAAATCT
CATTCTGGATTCCAGAAGAATTCAAGAGACTTGGGCTGTGAAATAAAACTTAGAGAAATTCCAACTGCTGCTCTTGTTCT
TGGTGTGAATGTCACAGATCATGATTTAACATTCAGAAGTCTAATAGAGGCCCTTCAGAATAATGTCACACCATATGTAG
TCTCATTGCAAGCTAAAGATTGTCCAGATATAAAACATTTTTTGCAAAAGTTGGTCTCACAGTTAATGGACTGCTGTGTA
GATATAAAATCCAAAGAGGAGGAAGGTGTTCAGGTGACCCAGAGAAAGACACATTATTCAATGGACTCACTTTCCAGTTG
GTATATGACCGTCACACAGAAGAGAGACCCAAAAATGCCAAGCAAAAAGAGGACTACTTCTAGCCAATGGCAGTCTCCTC
CTGTTGTGGTTATCTTGAAGGATATGGAAAGCTTTACCACAAAAGTACTGCAAGACTTCGTAATTATCAGCAGAATTAGT
CAACATCTGCATGAATTTCCACTAATACTCATTTTTGGAATTGCCACATCTCCTATTATCATCCATCGATTGCTTCCTCA
TGCAGTATCATCTCTGTTGTGCATAGAACTGTTCCAATCTTTGCCTTGCAAGGAGCACCTGACTACAGTACTTGATAAGC
TACTTCTTACAACTCAGTTTCCCTTTAAAATAAATGAAAAGGTATTACAGGTTCTGACCAACATCTTTTTGTATCATGAT
TTCTCAATTCAAAACTTTATAAAAGGACTTCAGCTTTCTCTATTAGAGCATTTCTATTCCCAGCCCTTAAGTGTACTGTG
CTGTAATCTTCCAGAAGCCAAAAGAAGAATAAATTTTTTGTCAAATAATCAATGTGAAAACATTCGCCGTCTTCCATCTT
TTAGGAGGTACGTGGAAAAGCAAGCTTCAGAAAAGCAAGTTGCACTCTTGACCAAGGAGAAATGTTTGAAGGAGGAAACA
CAATTATTACTAGAAAACCTGCATGTTTATCATATGAATTACTTCCTGGTTTTGAGATGTCTTCATAAGTTTACCTCTTC
TCTTCCCAAGTATCCACTGGGTCGACAGATCAGAGAGTTGTACTGTACATGTTTAGAAAAGAACATATGGGATTCAGAGG
AGTATGCATCAGTCTTGCAACTGCTGAGGATGTTGGCAAAGGATGAATTGATGACCATACTTGAGAAATGTTTCAAGGTT
TTTAAGTCTTGTGAAAAGCACCTTGGCAGCACAGCTAAGAGAATAGAGGAGTTCCTGGCCCAGTTTCAGAACCTTGATGA
AACCAAAGAGGAAGAAGATGCTTCTGGGTCACAGCCAAAGGGGCTTCAGAAGACAGACCTCTATAATCTTCAGAAGTCCT
TATTGGAAATGAAGGAGTTAAGAAGAAGTAAGAAGCCAACGAAATTTGAAGTACTCAGAGAAAATGTTGTGAACTTCATT
GACTGTCTAGTGAGAGAATACCTTCTGCCTCCTGAGACACAGCCTCTCCATGAGGTGGTGTACTTCAGTGCTGCCCATGC
CCTTCGTGAGCATTTAAATGCTGCTCCGCGAGTTGCCCTCCATACTGCACTCAACAATCCTTACTATTATCTAAAGAATG
AAGCGCTGAAAAGTGAAGAAGGCTGCATTCCAAATATCGCCCCAGACATCTGCATAGCATATAAACTGCACCTAGAGTGT
AGCAGGCTAATCAACCTTGTGGACTGGTCAGAGGCTTTTGCAACAGTTGTGACAGCTGCTGAAAAAATGGATGCAAATTC
TGCAACCTCAGAAGAAATGAATGAAATTATCCATGCTCGGTTTATTAGAGCTGTTTCTGAACTAGAACTTTTAGGATTTA
TAAAACCTACCAAACAGAAGACTGACCATGTGGCAAGGCTAACATGGGGAGGCTGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 7 .48 RPM |
| SRP051959_heart | 13 .63 RPM |
| SRP051959_kidney | 14 .09 RPM |
| SRP051959_liver | 8 .69 RPM |
| SRP051959_lung | 12 .62 RPM |
| SRP051959_lymph_node | 12 .05 RPM |
| SRP051959_skeletal_muscle | 9 .22 RPM |
| SRP051959_spleen | 11 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000135336 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002821 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012990 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016830 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018408 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_913 | 84.96 | 86.07 | Please wait, loading  |
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Download FASTA sequences of all ENSCJAG00000000730 retrocopies