Parental gene:

RFK, ENSCHOG00000009540

Aliases:None
Description:riboflavin kinase [Source:HGNC Symbol;Acc:30324]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_3482:2103..6039(-)


>ENSCHOG00000009540
AACTTTCCTGAGCAAGTAGTAGATAATCTTCCAGCTGATATATCCACCGGCATTTATTATGGTTGGGCCAGTGTTGGAAG
TGGAGATGTCCATAAGATGGTGGTGAGCATAGGATGGAACCCATACTACAAGAATACGAAAAAGTCCATGGAAACTCATA
TTATACATACCTTCAAAGAGGACTTCTATGGGGAAATGCTCAATGTGGCCATTGTTGGCTACATCAGACCAGAAAAGAAC
TTTGATTCTTTAGAGTCACTTATTTCAGCAATTCAAGGTGATATTGAGGAAGCTAAGAAACAACTAGAATTACCAGAACA
TTTGAAACTTAAAGAAGACAATTTCTTCCAGGTTCCTAAAAGCAAAATAATGAATGGCCACTGC

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003553 ortholog_one2one 1 retrogene
retro_amel_611,
Callithrix jacchus ENSCJAG00000031816 ortholog_one2many 3 retrogenes
retro_cjac_2553, retro_cjac_4032, retro_cjac_654,
Homo sapiens ENSG00000135002 ortholog_one2one 5 retrogenes
retro_hsap_2590, retro_hsap_2693, retro_hsap_2828, retro_hsap_305, retro_hsap_532,
Gorilla gorilla ENSGGOG00000010358 ortholog_one2many 1 retrogene
retro_ggor_339,
Macropus eugenii ENSMEUG00000000988 ortholog_one2one 6 retrogenes
retro_meug_1179, retro_meug_1815, retro_meug_1922, retro_meug_2144, retro_meug_268, retro_meug_698,
Monodelphis domestica ENSMODG00000001904 ortholog_one2many 2 retrogenes
retro_mdom_1404, retro_mdom_194,
Nomascus leucogenys ENSNLEG00000002051 ortholog_one2one 4 retrogenes
retro_nleu_1502, retro_nleu_1523, retro_nleu_1787, retro_nleu_2401,
Pongo abelii ENSPPYG00000019302 ortholog_one2many 5 retrogenes
retro_pabe_1224, retro_pabe_1622, retro_pabe_1763, retro_pabe_217, retro_pabe_2289,
Pan troglodytes ENSPTRG00000021036 ortholog_one2one 3 retrogenes
retro_ptro_1514, retro_ptro_246, retro_ptro_398,
Pteropus vampyrus ENSPVAG00000014032 ortholog_one2one 4 retrogenes
retro_pvam_1063, retro_pvam_255, retro_pvam_347, retro_pvam_951,
Sarcophilus harrisii ENSSHAG00000015887 ortholog_one2many 3 retrogenes
retro_shar_79, retro_shar_85, retro_shar_99,
Tursiops truncatus ENSTTRG00000014859 ortholog_one2one 4 retrogenes
retro_ttru_1624, retro_ttru_164, retro_ttru_1822, retro_ttru_95,
Vicugna pacos ENSVPAG00000002619 ortholog_one2one 1 retrogene
retro_vpac_360,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_75 79.07 100.00
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2. retro_chof_182 84.92 97.66
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3. retro_chof_210 75.73 79.69
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4. retro_chof_218 86.72 100.00
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5. retro_chof_302 76.56 100.00
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6. retro_chof_372 81.51 92.19
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7. retro_chof_374 79.46 87.50
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8. retro_chof_404 91.41 100.00
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9. retro_chof_497 61.45 64.06
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10. retro_chof_523 79.84 100.00
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11. retro_chof_633 72.32 85.94
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12. retro_chof_640 88.43 93.75
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13. retro_chof_834 76.56 100.00
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14. retro_chof_882 83.78 86.72
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15. retro_chof_927 82.81 100.00
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16. retro_chof_983 89.06 100.00
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17. retro_chof_1009 75.40 96.09
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18. retro_chof_1035 95.31 100.00
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19. retro_chof_1036 67.94 100.00
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20. retro_chof_1399 81.44 75.00
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21. retro_chof_1415 83.85 100.00
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22. retro_chof_1426 80.77 100.00
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23. retro_chof_1506 98.44 100.00
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24. retro_chof_1743 99.22 100.00
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25. retro_chof_1816 98.44 100.00
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26. retro_chof_1898 86.07 94.53
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27. retro_chof_2088 65.65 99.22
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28. retro_chof_2122 93.75 100.00
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29. retro_chof_2138 80.47 100.00
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30. retro_chof_2139 76.34 100.00
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31. retro_chof_2283 89.76 99.22
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32. retro_chof_2307 81.36 91.41
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33. retro_chof_2600 69.92 94.53
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34. retro_chof_2651 82.54 98.44
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35. retro_chof_2675 84.50 100.00
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Download FASTA sequences of all ENSCHOG00000009540 retrocopies