Parental gene:

PAIP1, ENSCHOG00000004961

Aliases:None
Description:poly(A) binding protein interacting protein 1 [Source:HGNC Symbol;Acc:16945]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_6397:32675..72050(-)


>ENSCHOG00000004961
ATGTCGGACGGTTTCGATCGGGCCCCAGGTGCTGGTCGGGGCCGGAGCCGGGGCCTGGGCCGCGGAGGGGGCGGGCCTGA
GGGCGGCAGTTTACCGAACGGAGCGGGGCCTGTTGAGCGGCCGCGGCACCAGCCGCCGCCTCAGCCCAAAGCCCCGGGCT
ACCTGCAGCCGCCGCCGCTGCGCCAGCCCAGAACGGCCCCGCCGCCCGGGGCCCAGTGCGAGGTCCTCACCGGCCCCCAG
CGGCCTCCCCGGCCCGGGGCTCTCCCAGAACAAACGAGGTCCTTGAGAGCTCCACCTAGTTCACAGGATAAAGTCCCACA
GCAGAACTCGGATTCAGCAATGGCTAAACCCCAGGTGGTTGTAGCTCCTGTATTAATATCTAAGCTGTCTGTGAACGCCC
CGGAATTTTACCCATCAGGTTATTCTTCTAATTATACAGAATCCTATGAGGATGATTGTGAGGATTATCCTACTCTATCA
GAATATGTTCAAGACTTTTTGAATCATCTTACAGAGCAACCTGGCAGTTTTGAAACTGAAATTGAACAATTTGCAGAGAC
CCTGAATGGCTGGGTTACAACAGATGATGCTTTGCAAGAACTTGTGGAACTCATCTATCAGCAGGCCACATCTATCCCCA
ATTTTTCCTACATGGGAGCTCGCCTGTGTAATTACCTGTCTCATCATCTGACAATTAGCCCACAGAGTGGCAACTTCCGC
CAATTGCTACTTCAAAGATGTCGGACTGAATATGAAGTTAAAGATCAAGCTGCAAAAGGGGATGAAGCGACCCGAAAACG
ATTTCATGCATTTGTCCTCTTTCTAGGAGAACTTTATCTTAACCTGGAGATCAAGGGAACAAATGGACAGGTTACAAGAG
CAGATATTCTTCAGGTTGGTCTTCGGGAGTTGCTAAATGCCCTCTTTACTAATCCTGTGGATGATAACTTAATTTGTGCA
GTAAAATTACTGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATGTAAAACAGATGCTCTTGAAGCTGGTAGAACTCG
GGTCAAGTAACTGGGGTAGAGTCCATGCAACCTCACCATACAGAGAAGCAACACCTGAAAATGATCCAAACTATTTTATG
AATGAACCAACGTTTTATACATCTGATGGTGTTCCTTTCACTGCAGCTGATCCAGATTACCAAGAGAAATATCAAGAGTT
ACTTGAAAGAGAAGACTTTTTTCCAGATTATGAAGAAAATGGAACAGATTTATCTGGGGCTGGTGATCCATACTTGGATG
ATATTGATGATGAGATGGACCCAGAGATAGAAGAAGCTTATGAATTTTGTTTAGAATCAGAGCGTAAGCGAAAACAGTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020376 ortholog_one2one 1 retrogene
retro_btau_359,
Callithrix jacchus ENSCJAG00000001340 ortholog_one2one 2 retrogenes
retro_cjac_3224, retro_cjac_3337,
Erinaceus europaeus ENSEEUG00000009651 possible_ortholog 1 retrogene
retro_eeur_304,
Homo sapiens ENSG00000172239 ortholog_one2one 1 retrogene
retro_hsap_1726,
Otolemur garnettii ENSOGAG00000001887 ortholog_one2one 2 retrogenes
retro_ogar_1096, retro_ogar_1241,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_762 84.50 55.95
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Download FASTA sequences of all ENSCHOG00000004961 retrocopies