Parental gene:

UBFD1, ENSCAFG00000017670

Aliases:None
Description:ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:30565]
Organism:Dog (Canis familiaris)
Coordinates:6:22264111..22275990(-)


>ENSCAFG00000017670
GCAGGGGCCGGGCCGGGGAAGCGGAGGAGGCGGGTCTCCATAGAAACGTCCACCTGTTTCCGGCCAGGCTGTGCGAGATT
AGGGGCTGCTGCGGGGGCCAATCTCAGGCGGCCTTTGCGGGAGCGGTGGGTGTTGTACACAATCATCATGGCGGCGGCCG
GAGCCCCGGATGGCATGGAGGAACCTGGCATGGACACGGAGGCCGAGACGGTGGCGACCGAGGCCCCCGCGCGGCCCCTG
AACTGCGTGGAGGCCGAAGCCGCGGCGGGGGCGGCGGCGGCCGAGGACTCCTGCGCGGCGCGAGGCAACCTGCAGCCAGC
CCCGGCCCAGCCCCCTGGGGACCCTGCGGCCCAGGCCTCGGTCAGCAACGGCGAAGACGCCGGCGGCGGCGCCGGCAGGG
AGCTGGTGGACCTGAAGATCATCTGGAACAAGACTAAACACGACGTGAAGTTCCCCCTGGACAGCACAGGTTCCGAGCTG
AAACAGAAGATTCACTCGATTACAGGTCTCCCTCCTGCCATGCAGAAAGTCATGTATAAGGGACTTGTCCCCGAGGATAA
GACGTTGAGAGAAATAAAAGTGACCAGCGGAGCCAAGATCATGGTGGTTGGCTCCACGATAAATGATGTTTTAGCTGTAA
ACACACCCAAAGATGCTGCCCAGCAGGATGCAAAGGCCGAAGAGAACAAGAAGGAGCCACTCTGCAGGCAGAAACAACAC
AGGAAAGTGTTGGATAAAGGAAAACCTGAAGATGTGATGCCATCTGTTAAGGGTGCCCAGGAACGCCTGCCGACGGTACC
CTTATCTGGCATGTACAATAAGTCCGGAGGCAAAGTGAGGCTCACCTTCAAGCTAGAACAAGACCAGCTGTGGATCGGCA
CTAAAGAGCGGACTGAGAAATTGCCCATGGGCTCCATTAAAAATGTGGTCAGTGAACCTATCGAAGGACATGAAGACTAC
CACATGATGGCGTTTCAGTTGGGCCCCACGGAAGCCTCTTACTACTGGGTGTACTGGGTCCCAACTCAATATGTGGATGC
AATCAAAGACACTGTGCTGGGGAAGTGGCAGTATTTTTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 31 .33 RPM
SRP017611_brain 18 .82 RPM
SRP017611_kidney 21 .20 RPM
SRP017611_liver 10 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000029331 ortholog_one2one 2 retrogenes
retro_acar_106, retro_acar_204,
Callithrix jacchus ENSCJAG00000020614 ortholog_one2many 1 retrogene
retro_cjac_372,
Monodelphis domestica ENSMODG00000006727 ortholog_one2one 2 retrogenes
retro_mdom_1162, retro_mdom_1298,
Pongo abelii ENSPPYG00000007191 ortholog_one2one 1 retrogene
retro_pabe_2528,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1952 93.21 73.82
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Download FASTA sequences of all ENSCAFG00000017670 retrocopies