Parental gene:

TMCO1, ENSCAFG00000013472

Aliases:None
Description:transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:18188]
Organism:Dog (Canis familiaris)
Coordinates:38:17579695..17630212(+)


>ENSCAFG00000013472
ATGAGCACCATGTTCGCGGATACGCTGCTCATCGTTTTTATCTCCGTGTGCACCGCTCTTCTGGCCGAGGGTATAACATG
GGTCCTGGTTTACAGGACAGACAAGTACAAGAGACTCAAAGCGGAAGTGGAGAAACAGAGTAAAAAGTTGGAAAAGAAGA
AGGAAACAATAACAGAGTCAGCTGGTCGACAACAAAAAAAGAAAATAGAGAGGCAAGAAGAGAAACTGAAAAATAACAAC
AGGGACCTTTCCATGGTCCGAATGAAATCCATGTTTGCAATTGGCTTTTGTTTTACTGCCCTAATGGGAATGTTCAATTC
TATATTTGATGGTAGAGTGGTGGCAAAACTGCCTTTCACCCCCCTTTCCTATATCCAAGGACTGTCTCATCGAAATCTGC
TGGGGGATGACACCACAGACTGTTCCTTCATCTTTCTGTATATTCTCTGTACCATGTCAATTCGACAGAACATCCAGAAG
ATTCTTGGTCTTGCCCCTTCACGTGCTGCCACCAAGCAGGCAGGTGGATTTCTTGGCCCTCCACCTCCTTCTGGGAAATT
TTCTTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 20 .12 RPM
SRP017611_brain 13 .89 RPM
SRP017611_kidney 59 .04 RPM
SRP017611_liver 15 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010009 ortholog_one2one 1 retrogene
retro_btau_1441,
Echinops telfairi ENSETEG00000009382 ortholog_one2one 2 retrogenes
retro_etel_1552, retro_etel_570,
Macropus eugenii ENSMEUG00000011045 ortholog_one2one 2 retrogenes
retro_meug_894, retro_meug_997,
Monodelphis domestica ENSMODG00000001335 ortholog_one2one 2 retrogenes
retro_mdom_1319, retro_mdom_334,
Oryctolagus cuniculus ENSOCUG00000008441 ortholog_one2one 2 retrogenes
retro_ocun_1148, retro_ocun_1642,
Sarcophilus harrisii ENSSHAG00000016602 ortholog_one2one 1 retrogene
retro_shar_790,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_833 83.65 54.79
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2. retro_cfam_1640 94.26 64.89
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Download FASTA sequences of all ENSCAFG00000013472 retrocopies