Parental gene: | ETV5, ENSCAFG00000013420 |
| Aliases: | None |
| Description: | ets variant 5 [Source:HGNC Symbol;Acc:3494] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 34:18729597..18788313(-) |
>ENSCAFG00000013420
TGCCCCCCAAAGCACCAGGAGGGGTTAAGTGACACAGGAGGACCCCTTTCCCCCCAGAAATTACTCAATGCTGAAACCTT
TCAAAGTGATATTCGAGGCGTTGGAAGCACCATGGATGGGTTTTATGATCAGCAAGTCCCTTTTATGGTCCCAGGGAAAT
CTCGATCAGAGGAATGTCGAGGGCGGCCTGTGATTGACAGAAAGAGAAAGTTTTTGGACACAGATCTGGCCCATGATTCT
GAAGAGTTGTTTCAGGATCTCAGTCAACTTCAAGAGGCTTGGTTAGCTGAAGCACAAGTTCCTGATGATGAACAGTTTGT
CCCAGATTTCCAGTCTGATAACTTGGTGCTTCATGCCCCACCTCCAACCAAGATCAAACGGGAGCTGCACAGCCCCTCCT
CGGAGCTGTCATCCTGTAGCCACGAGCAGGCTCTCGGTGCTAACTATGGAGAAAAGTGCCTCTACAGCTATTGTGCCTAT
GATAGGAAGCCTCCCTCCGGGTTCAAGCCATTAACCCCTCCCACCACCCCCCTGTCCCCCACCCATCAGAGCTCCCTCTT
CCCCCCGCCCCAGCCAAGTCTGCCCACCCCTGCGCACGCCCCCGCGGCTGGCCCAGTACCAGGGGTGGGCCCTGCCCCCG
CCCCCCACTCGCTTCCGGAACCTGGACCACAGCAGCAAACCTTTGCGGTCCCCCGGCCACCACATCAGCCCCTGCAGATG
CCAAAGATGATGCCTGAAAACCAGTATCCATCAGAACAGAGATTTCAGAGACAACTGTCTGAACCCTGCCACCCCTTCCC
TCCTCAGTCAGGAGTTCCTGGAGATAATCGCCCCAATTACCACCGGCAAATGTCAGAACCCATTGTCCCTGCAGCTCCCC
CACCCCCTCAGGGATTCAAACAAGAATACCATGATCCACTCTATGAACATGGGGTCCCAGGCATGCCAGGCCCCCCAACA
CATGGGTTCCAGTCACCAATGGGAATCAAGCAGGAGCCCCGGGATTACTGCGTTGATTCAGAAGTGCCTAACTGCCAGTC
ATCCTATATCAGAGGGGGGTATTTCTCCAGCAACCATGAAGGTTTTTCATATGAAAAAGATCCCCGGTTGTACTTTGACG
ACACTTGTGTTGTTCCTGAGAGACTGGAAGGCAAAGTCAAGCAAGAGCCCACCATGTATCGGGAGGGGCCCCCTTACCAG
AGGCGAGGTTCTCTTCAGCTGTGGCAGTTCCTGGTTACTCTGCTGGATGACCCAGCCAATGCCCACTTCATTGCCTGGAC
AGGCCGTGGCATGGAGTTTAAGCTGATAGAACCTGAGGAGGTTGCTCGGCGTTGGGGCATCCAGAAGAACCGGCCAGCCA
TGAATTATGACAAGCTTAGCCGTTCTCTACGCTATTACTATGAAAAGGGCATCATGCAGAAGGTGGCTGGGGAGCGATAC
GTCTATAAGTTTGTGTGTGACCCGGATGCCCTCTTCTCCATGGCCTTCCCTGACAACCAGCGTCCGTTCCTGAAAGCAGA
GTCCGAGTGTCACCTCACCGAGGAGGATACCCTGCCCCTGACCCACTTTGAAGACAACCCGGCTTACCTCCTGGACCTGG
ACCGCTGCGGCAGCCTCCCCTACGCCGAGGGCTTTGCTTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012049_cerebellum | 95 .42 RPM |
| SRP017611_brain | 158 .71 RPM |
| SRP017611_kidney | 11 .95 RPM |
| SRP017611_liver | 5 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010304 | other_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000013089 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001785 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009845 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1414 | 92.92 | 64.17 | Please wait, loading  |
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Download FASTA sequences of all ENSCAFG00000013420 retrocopies