Parental gene:

ENSCAFG00000005385

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:16:22738231..22768735(-)


>ENSCAFG00000005385
ATGGCGGCCACGGAGGGGGTGGGAGAGGCTGCGCAGGGCAGCGAGTCCGCACAGCCGGAGCCACCGCCGCCCCAGCCGCA
CCCTCCGCCGCTCCAGCCGCAGCAGCAAGAGGAAGCCATGGCGGCAGAACTGGGAGAAGCGGTGGCGTCCCCCATGGACG
ACGGGTTCCTGAGCCTGGACTCGCCCACCTATGTCCTATACAGGGACAGAGCAGAATGGGCTGATATAGATCCAGTGCCG
CAGAATGATGGCCCCAATCCAGTGGTCCAGATCATTTATAGTGAAAAATTTAGAGATGTTTATGATTATTTCCGGGCTGT
TCTGCAGCGTGATGAAAGAAGTGAACGAGCTTTTAAACTAACCAGAGATGCTATTGAGTTAAATGCAGCCAATTACACAG
TGTGGCATTTTCGGAGAGTTCTCTTAAAGTCACTTCAAAAGGATCTGCATGAAGAAATGAACTACATCACTGCGATAATT
GAGGAACAGCCTAAAAACTATCAAGTTTGGCATCATAGGCGAGTATTAGTGGAATGGCTAAAAGATCCATCTCAGGAGCT
TGAGTTTATTGCTGATATTCTTAATCAGGATGCAAAGAATTATCATGCCTGGCAACATCGACAATGGGTTATCCAGGAAT
TTAAACTTTGGGATAATGAGCTGCAGTATGTAGACCAACTTCTTAAAGAGGATGTGAGAAATAACTCTGTATGGAACCAA
AGATACTTCGTAATTTCTAACACCACTGGCTACAATGATCGTGCTATATTGGAGAGAGAAGTCCAGTACACTCTGGAAAT
GATCAAACTAGTACCGCATAATGAAAGCGCATGGAACTATTTGAAAGGGATTTTACAGGATCGTGGTCTTTCCAGATACC
CCAATCTGTTAAGTCAGTTACTTGATTTACAACCAAGTCACAGTTCCCCCTACCTGATTGCCTTTCTCGTGGATATCTAT
GAAGACATGCTAGAAAACCAATGTGACAACAAGGAGGACATTCTTAATAAAGCATTAGAGTTGTGTGAAATTCTAGCTAA
AGAAAAGGACACTATAAGAAAGGAATATTGGAGATATATTGGAAGATCCCTTCAAAGCAAACATAGCACAGAGAGTGACC
CACCAACAAATGTACAGCAATAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 49 .05 RPM
SRP017611_brain 44 .94 RPM
SRP017611_kidney 116 .69 RPM
SRP017611_liver 29 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003201 ortholog_one2one 2 retrogenes
retro_btau_1431, retro_btau_1768,
Homo sapiens ENSG00000168522 possible_ortholog 1 retrogene
retro_hsap_805,
Macaca mulatta ENSMMUG00000017158 ortholog_one2one 1 retrogene
retro_mmul_1078,
Monodelphis domestica ENSMODG00000010003 ortholog_one2one 1 retrogene
retro_mdom_1656,
Nomascus leucogenys ENSNLEG00000012979 ortholog_one2one 1 retrogene
retro_nleu_2408,
Pteropus vampyrus ENSPVAG00000013502 ortholog_one2one 2 retrogenes
retro_pvam_1157, retro_pvam_1433,
Tursiops truncatus ENSTTRG00000008870 ortholog_one2one 1 retrogene
retro_ttru_579,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_941 83.08 50.79
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000005385 retrocopies