Parental gene:

LGALS1, ENSCAFG00000001487

Aliases:None
Description:Canis lupus familiaris galectin-1 (LGALS1), mRNA. [Source:RefSeq mRNA;Acc:NM_001201488]
Organism:Dog (Canis familiaris)
Coordinates:10:26932213..26935580(-)


>ENSCAFG00000001487
ATGGACCCGGTTGGGAGCAGCGACTTGCCCAGGACCACCCAGAGGGAATCTAGAACTTGGGCCGGGTTCCCCTGGCTTCT
AGCGGGCGGGGTCAGATGGTCCGGGGCGGGGACGACCCCCGGCCCCACCCACCCCACCCCACCCCCGCCACCGCGTCCCC
TAACCCGGCTGGCTGCGGTCCCGTCTCTGCAGGGTCTGGTCGCCAGCAATCTGAGTCTCAAACCTGGGCAGTGCCTCAGA
GTGCAATGCGAGGTGGTCCCCGAAGCCAAGAGCTTCGTGCTGAACCTGGGCAAAGACGGGGACAACCTGTGCCTGCACTT
CAACCCTCGCTTTGAAGCCCATGGCGACGTCAACACCATTGTGTGTAACAGCAAGGATGGCGGGGCCTGGGGCGAGGAGC
TTCGAGAGTCCGCCTTCCCCTTCCAGCCCGGGACTGTCACAGAGGTGTGCATCTCCTTCGACCAGGCTGACTTGACCATC
AAGCTGCCAGATGGATACACCTTCAAGTTCCCCAACCGCCTCAACCTGGAGGCCATCAGCTACCTGGCAGCTGATGGTGA
CATGAAGATCAAGTGCCTGGCTTTTGACTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 40 .86 RPM
SRP017611_brain 15 .08 RPM
SRP017611_kidney 7 .59 RPM
SRP017611_liver 3 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Otolemur garnettii ENSOGAG00000006935 ortholog_many2many 5 retrogenes
retro_ogar_11, retro_ogar_1178, retro_ogar_2084, retro_ogar_467, retro_ogar_64,
Tursiops truncatus ENSTTRG00000004798 ortholog_one2many 1 retrogene
retro_ttru_1501,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_141 97.78 100.00
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Download FASTA sequences of all ENSCAFG00000001487 retrocopies