Parental gene:

C13H20ORF43, ENSBTAG00000027390

Aliases:RTFDC1, C13H20orf43
Description:UPF0549 protein C20orf43 homolog [Source:RefSeq peptide;Acc:NP_001069093]
Organism:Cow (Bos taurus)
Coordinates:13:59983722..60027251(-)


>ENSBTAG00000027390
ATGGGTTGCGACGGAGGAACAATCCCTAAGAGGCATGAACTGGTGAAGGGGCCGAAGAAGGTTGAGAAGGTCGACAAGGA
TGCTGAATTAGTGGCCCAGTGGAACTACTGTACTCTAAGTCAGGAAATATTAAGACGACCAATAGTTGCCTGTGAACTTG
GCAGACTTTACAACAAAGATGCAGTCATTGAATTTTTATTGGACAAATCTTCCGAAAAGGCTCTTGGGAAGGCAGCCTCT
CACATTAAAAGCATTAAGAATGTGACAGAACTGAGGCTCTCTGACAACCCCGCCTGGGAAGGCGATAAAGGAAACACTAA
AGGTGACAAGCATGATGACCTCCAGCGGGCACGTTTCATCTGCCCTGTCGTGGGCTTGGAAATGAACGGCCGACACAGGT
TTTGCTTCCTCCGGTGCTGTGGTTGCGTGTTTTCTGAGCGAGCCCTAAAAGAGATCAAAGCAGAAGTTTGTCACACGTGT
GGGGCTGCCTTCCAGGAGGATGACGTCATCGTGCTCAATGGCACCAAGGAAGACGTGGAAGTACTGAAGAGCAGGATGGA
GGAGAGGCGGCTGCGAGCCAAGCTGGGGAAGAAAACAAAGAAACCTAAGGTGGCAGAGTCTGTCTCAAAATCAGAAGTCA
GTGAAGAAACCCCAGGACCATCAAAAGTGAAAACAGGGAAGCCCGAAGAAACCAGCCTTGACACTCGAGAGAAGAAGACC
AACTCGGCTCCCAAAAGTGCAGCAGCACACGGGATCACTTCTGGAAAAGCCGCTAAGAGGTCCATCGCCGACAGCGAAGA
GTCAGAAGCTTACAAGTCTCTCTTCACCACCCACAGCTCCGCCAAGCGCTCCAAGGAGGAGTCGGCCCACTGGGTCACCC
ACACATCCTACTGCTTCTGA

Library Parental gene expression (RPM)
ERP005899_liver 6 .92 RPM
ERP005899_muscle 23 .02 RPM
SRP017611_brain 31 .34 RPM
SRP017611_kidney 29 .99 RPM
SRP017611_liver 9 .59 RPM
SRP030211_testis 59 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000003143 ortholog_one2one 1 retrogene
retro_etel_2095,
Mus musculus ENSMUSG00000027502 ortholog_one2one 1 retrogene
retro_mmus_339,
Ornithorhynchus anatinus ENSOANG00000009249 ortholog_one2one 1 retrogene
retro_oana_124,
Otolemur garnettii ENSOGAG00000004444 ortholog_one2one 1 retrogene
retro_ogar_3150,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1076 76.67 59.53
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Download FASTA sequences of all ENSBTAG00000027390 retrocopies