Parental gene:

BT.106043, ENSBTAG00000020981

Aliases:None
Description:E3 ubiquitin-protein ligase MARCH5 [Source:UniProtKB/Swiss-Prot;Acc:Q3ZC24]
Organism:Cow (Bos taurus)
Coordinates:26:13831826..13865056(+)


>ENSBTAG00000020981
AGAAGTTGCTGGGTGTGTTTTGCCACTGATGAAGATGATAGAACAGCTGAATGGGTGAGACCGTGCAGATGCAGAGGATC
TACAAAATGGGTTCACCAGGCTTGTTTACAGCGCTGGGTGGATGAAAAACAAAGAGGAAACAGTACAGCCAGAGTGGCAT
GTCCTCAGTGCAATGCTGAATACTTAATAGTTTTTCCAAAGTTGGGTCCAGTTGTTTACGTCTTGGATCTTGCAGATAGA
CTGATCTCAAAAGCCTGTCCATTTGCTGCAGCAGGAATAATGGTTGGCTCCATCTATTGGACAGCTGTGACTTACGGAGC
GGTGACAGTGATGCAGGTTGTAGGCCATAAAGAAGGTCTGGATGTTATGGAGAGAGCTGATCCTTTATTCCTTTTAATTG
GACTTCCTACTATTCCTGTCATGCTGATACTAGGCAAGATGATTCGCTGGGAGGACTATGTGCTTAGACTCTGGCGCAAA
TACTCAAATAAACTACAAATTTTGAACAGTATATTCCCAGGGATTGGTTGTCCTGTTCCTCGAATTCCAGCTGAGGCTAA
TCCTTTAGCAGATCATGTCTCTGCCACCCGAATTTTGTGTGGAGCCCTTGTTTTTCCTACTATTGCGACAATAGTTGGTA
AACTAATGTTCAGTAGTGTTAACTCTAATTTACAAAGGACAATCTTGGGTGGAATTGCTTTTGTTGCCATTAAAGGAGCA
TTCAAGGTTTACTTCAAACAGCAGCAATATTTACGTCAGGCACACCGCAAAATCCTAAATTACCCAGAGCAAGAAGAAGC
ATAA

Library Parental gene expression (RPM)
ERP005899_liver 12 .62 RPM
ERP005899_muscle 17 .95 RPM
SRP017611_brain 11 .69 RPM
SRP017611_kidney 16 .30 RPM
SRP017611_liver 10 .27 RPM
SRP030211_testis 15 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Macropus eugenii ENSMEUG00000011031 ortholog_one2one 1 retrogene
retro_meug_1192,
Mus musculus ENSMUSG00000023307 ortholog_one2one 3 retrogenes
retro_mmus_1559, retro_mmus_3211, retro_mmus_3373,
Sarcophilus harrisii ENSSHAG00000018432 ortholog_one2one 1 retrogene
retro_shar_459,
Xiphophorus maculatus ENSXMAG00000007675 ortholog_one2one 1 retrogene
retro_xmac_25,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1749 97.00 100.00
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Download FASTA sequences of all ENSBTAG00000020981 retrocopies