Parental gene:

FBLIM1, ENSBTAG00000018725

Aliases:None
Description:Filamin-binding LIM protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1JQB5]
Organism:Cow (Bos taurus)
Coordinates:16:53027480..53049143(-)


>ENSBTAG00000018725
ATGGCCTCCAAGCCTGAGAAGAGGGTCGCCTCGTCTGTCTTTATCACCCTGGTGCCCCCACGTCGAGATGAGGCTGTGGT
TGAGGAGGTGAGGCGAGCAGCTTGTGAGGCCTGGCCTGGCCGCCCCTGGGAATCTGCCCCCACGAAGGCACCCGGGGCTG
GCTCGGTGGGAAAGCTCCGCTCCTGGATGCCCCCTGGCAGGGCTGCAGCCCCAGGGCCAGCTGTTCCACCTCAGCTCTCC
AATGGAGGGTGTTCGCTTCCTCCTCCGCCCCTGGACGTTGACGATGCACTTCCAGACCTGGACCTCCTCCCACCTCCGCC
TCCGCCCCCCGCAGCGGACCTGCCCCCTCCTGACGAAGAGCCCCACTCCGCGATGGGGGCATCACTCATTTCAGACTTAG
AGCAGTTGCACCTGCCCCCTCCCCCACCCCCGCCACAGGCCCTGGTGGAGGGGCCTCCACTGCAGCCTCGGCCCAGTCAT
CTCAAGCCCGCAGAGGAGGAGCTGCCGCCCCCTCCCGAAGAGCCTGTCAGCTTCCCTGAGAGAGAGGCCTCCACAGACAT
CTGTGCCTTCTGCCACAAGACTGTGTCCCCCCGAGAGCTGGCCGTAGAGGCCATGAAGAGGCAGTACCATGCCCAGTGCT
TCACGTGCCGTGTCTGTCGCCGCCAGCTGGCCGGGCAGAGCTTCTACCAGAAGGATGGGCGGCCCCTCTGTGAACCCTGC
TACCAGGACACCCTGGAGAAGTGTGGCAAGTGTGGCGAGGTTGTCCGGGAACACATCATCCGGGCCCTGGGCCAGGCCTT
CCACCCCTCCTGCTTCACGTGCGTGACCTGTGCCCGGCGCATCGGGGACGAGAGCTTTGCCCTGGACAGTCAGAATGAGG
TGTACTGCCTGGACGACTTCTACAGGAAGTTCGCCCCGGTGTGCAGCATCTGTGAGAATCCCATCATTCCCCGAGATGGG
AAGGATGCCTTCAAAATCGAGTGTATGGGAAGAAACTTCCATGAGAATTGCTACCGGTGTGAGGACTGCAGGGTCCTCCT
GTCTGTGGAGCCCACGGACCAGGGCTGCTACCCGCTGAACAACCGTCTCTTCTGCAAGCCGTGCCACGTGAAGCGGAGTG
CTGCGGGGTGCTGCTGA

Library Parental gene expression (RPM)
ERP005899_liver 1 .01 RPM
ERP005899_muscle 80 .82 RPM
SRP017611_brain 8 .54 RPM
SRP017611_kidney 43 .33 RPM
SRP017611_liver 1 .21 RPM
SRP030211_testis 8 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000024772 within_species_paralog 1 retrogene
retro_btau_1521,
Homo sapiens ENSG00000162458 ortholog_one2one 2 retrogenes
retro_hsap_4898, retro_hsap_778,
Gorilla gorilla ENSGGOG00000015190 ortholog_one2one 2 retrogenes
retro_ggor_3058, retro_ggor_645,
Macaca mulatta ENSMMUG00000032243 ortholog_one2one 2 retrogenes
retro_mmul_1095, retro_mmul_2635,
Nomascus leucogenys ENSNLEG00000007650 ortholog_one2one 2 retrogenes
retro_nleu_1265, retro_nleu_2840,
Pongo abelii ENSPPYG00000001837 ortholog_one2one 2 retrogenes
retro_pabe_3809, retro_pabe_751,
Pan troglodytes ENSPTRG00000000208 ortholog_one2one 2 retrogenes
retro_ptro_3266, retro_ptro_544,
Pteropus vampyrus ENSPVAG00000009000 ortholog_one2one 1 retrogene
retro_pvam_415,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1013 79.00 71.69
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Download FASTA sequences of all ENSBTAG00000018725 retrocopies