Parental gene: | BT.89177, ENSBTAG00000013317 |
| Aliases: | None |
| Description: | E3 ubiquitin-protein ligase RNF168 [Source:RefSeq peptide;Acc:NP_001069757] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 1:71629578..71653254(-) |
>ENSBTAG00000013317
ATGGCTGTACCCAAAGAGTCCATCCCTTCCTTGTTAGAATGTCAGTGTCAGATCTGTGTGGAAATCCTCTTCGAGCCTGT
GACACTGCCTTGTAACCACACGCTCTGTAAACCATGCTTCGAATCGACTGTCGAAAAGGCAAGTTTGTGCTGTCCCTTCT
GTCGCCGCCGGGTCTCTTCGTGGGCGCGGTACCGTAGCCGAACAAATTCTCTTGTTAATATGGAACTGTGGGAGATAATT
CAAAAACACTATCCAAAGGAATGCAAGCTAAGAGCCTCTGGGCAAGAATCAAAGGAAATAGTTGATGACTATCAGCCAGT
CCGCTTATTAAGTAAGCCTGGGGAATTAAGGAGAGAATATGAAGAGGAGATAAGCAAGGTAGAGGCAGAGCGGCGAGCCT
GTGAGGAAGAAGAAAACAAAGCCAGTGAAGAATACATTCAGAAATTACTGGCAGAGGAGGAAGAGGAGGAAAAGAGACAG
GCAGAAAAAAGGCACAGAGAAATGGAAGAACAACTGAAAAGTGATGAAGAACTGGCAAGAAGACTGAGCCTTGATATTAA
CAATTTCTGTGAGGGAAGTGTTTTGGCTTCGCCTTTGAATTCCAGAAAATCTGATCCAGTCACAACCAAATCACAAAAGA
AAAGTAAAAACAAACAAACAAACACTGGAGATATTCAGAAGTATTTGTCACCTAAATCTCAACTTGGGTCAGCATCACAG
TCTGAAGTTGTACAGGAAGACAGAAAAAGCTCCATGTCTAAGAAAATTGATGACAACAGTGATGTGAAGAGCCCTACATG
GCAAGACACAGAGGTTGAAGAAGATATGCCAACGCTTTCTCCTCAAATATATCTTGAAGTTCAGGAACAAGGTGCAAAGT
CTTCAGTGGAGTCACCTATGCCTCAGTTATATACCAGTGATGGAGAATGGTACCTTGAAGGAAAAGTTGAAACAGGACCA
AGCAATCATGAAAAAGGGTTATGTGTCATCAATCTTGAGGAACCTAAAGCCAGAGTTCCCTACTCTGGAGATGCTGCCAC
TGAGCCTTGTGGTGAAACAGAGAGTGAATGTACTGTATCAGATATGACACAGTTCCTTAGAAACAACACGGTTGGAACAG
AAAATGAAGAGTCTCACCTACAAATCAGTAAAGGTACCTCCAAAAGAAGAAACCTAGAACCTTTGTCTGAAGCAATCAGA
GAGCCATGCTTTTCTGCAAAAAGAAGGAAAATGTTCCCCAAAGCCTCCTCAGACCAAGAGGAAACAGAAATCAGCTTGAC
CCAAAAACTGATAGATTTGGAACATCTACTTTTTGAGAGACATAAGCAAGAAAAGCAGGACAGGTTATTAGCATTACAAC
TTCAGGAAGAGGTGGATCAAGAGCAAATGAGGCCAGACCGGCAAAAAGGATCCCCAGATGGATATCAGTTACGGACTGTG
TCCTCACCTCCAGACAAAGTACTAAATGGACAGAGAAAGAATTCCAGAGACAGAAATTCCAAAAGACAAACTGAGCTAGA
GCAGCCAAAACCTCGGACAGACTCAAAAAATGAAAACCATCAGCAACCTTCTTTTAAGATCCAGTTGAAATGTTCGGTTA
ATAGAAGAAAGATAGCAAATTCTACTAATGATAATTGTAATGTATCTAAAACTGCTCATTCCCTACAGCCTAGTAAGTCA
CAGAAAAGTATTTTTCAGATGTTTCAGAGAGTCACAAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 15 .07 RPM |
| ERP005899_muscle | 16 .89 RPM |
| SRP017611_brain | 17 .68 RPM |
| SRP017611_kidney | 24 .12 RPM |
| SRP017611_liver | 9 .21 RPM |
| SRP030211_testis | 17 .73 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000022131 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000010864 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012066 | ortholog_many2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000021829 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1816 | 67.89 | 52.01 | Please wait, loading  |
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Download FASTA sequences of all ENSBTAG00000013317 retrocopies