Parental gene: | RNFT1, ENSBTAG00000009747 |
| Aliases: | None |
| Description: | RING finger and transmembrane domain-containing protein 1 [Source:RefSeq peptide;Acc:NP_001069875] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 19:11112588..11123128(-) |
>ENSBTAG00000009747
TTCTCGCTGTTCCTGCCGTCGCTGCCTGGGCCTCGGTCCGCTCATCGTCATGAGAGGAGACAGAGCCGTGAAGCAAAGAA
ATCACAGAACAAGTATTCAAGGGCCATGCAAGCCAACTGTAGTCAACTGCACAGCCCTTCAGGAGCTGCAGGCAGTGAGG
ATGCCTCAGCCTCCCAGTGTGTCCAAGCAAGACTGACAGGAGAAGCTTCCTGTCTTTATTCTGGAGATGTTCATATCCCG
ATAAGCTCCCTACCTAAAGAATGTGCTGAAAATCCAAGCTCCAGAAATACAAGGTCAGGTGTCCACAGCTGTACCCACGG
ATGTACCCATAGTCGCTTACGGAGTCACACCCACAATGAAGCCAGGCAACCTGATGATAGCGACATGGAGTATGGAGATC
ATGGTAGCAGCTCCTTCTCAGAATTCCGGTATCTCTTCAAGTGGTTGCAGAAGAGTCTTCCATATATTTTGATTCTGGGT
GTCAAACTTGTTATGCAGCATACAACAGGAATTTCTCTTGGAATTGGGCTGCTTACAACTTTTATATATGCAAACAAAAG
CATTGTAAATCAGGTTTTTCTAAGAGAAAGGTGCTCAAAGATTCAGTGTGCTTGGTTACTGGTATTCTTAGCAGGATCTT
CTGTTCTTTTATATTACACCTTTCATTCTCAGTCACTTTATTACAGCTTAATTTTTTTAAATCCTACTTTGGACTATTCA
AGCTTCTGGGAAGTACTTTGGGTTGTTGGAATTACAGACTTCATTCTGAAATTCCTCTTCATGGGCTTAAAATGCCTTAT
TTTATTGGTGCCTTCTTTGATCATGCCTTTTAAATCCAAGGGTTACTGGTATATGCTTTTAGAAGAATTATGTCAGTATT
ACCGAACTTTTGTTCCCATACCAGTTTGGTTTCGTTACCTTATAAGCTATGGGGAGTTTGGTAATGTAACTAGATGGAGT
CTTGGGATATTGCTGGCTTTACTCTACCTCATACTAAAACTTCTGGACTTTTTTGGACACCTGAGAACTTTCAGACAGGT
TTTGCGAATATTTGTTACACGACCAAGTTACGGAGTCCCTGCCAGCAAGAGACAGTGTTCAGATGTGGATGATATTTGTT
CAATATGTCAAGCTGAATTTCAAAAGCCAATTCTTCTCATCTGTCAGCATATATTTTGTGAAGAGTGCATTACCTTATGG
TTTAACAGAGAAAAAACATGTCCGTTGTGCAGAACTGTGATTTCGGACCATATAAACAAATGGAAAGATGGAGCCACTTC
ATCACACCTTCAAATATATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 110 .74 RPM |
| ERP005899_muscle | 40 .49 RPM |
| SRP017611_brain | 9 .46 RPM |
| SRP017611_kidney | 55 .24 RPM |
| SRP017611_liver | 56 .48 RPM |
| SRP030211_testis | 50 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000014736 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000017671 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_413 | 54.07 | 55.43 | Please wait, loading  |
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| 2. | retro_btau_1229 | 62.11 | 57.74 | Please wait, loading |
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Download FASTA sequences of all ENSBTAG00000009747 retrocopies