Parental gene:

CDCA8, ENSACAG00000028556

Aliases:None
Description:cell division cycle associated 8 [Source:HGNC Symbol;Acc:14629]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL344018.1:104304..118500(+)


>ENSACAG00000028556
ATGGCTCCTTCAAAGAAGAAACGGTCAAAGGCACAGAGCAAAAATTCCCTCAGGGACAAACAGATCGATGCTTTCATTGA
GTCCTTTGACCAAGAAGTCAAAAGACGCGTTGAGAAACTCAGGGCGGACCTTAAGAACGTGCAGGAGAATATAAGCACCA
TGTTCGACCGGGAGATCCTGCGCCTGCCCACCGCCCTCAGAGAGATGAACTGGATCAGCTACTGCGCCCTCGGAGAAGAC
CCGGCAGTCCTAGAGCAGCTTGCCTTGGAGGGAACGGACGTCCAGGAAATCAACGAGATGGCCTCCAAGGCTTTGCGGAC
CCCCGTCCGAACTGTCCGGAAAGCTGCAAAGGCCAAGCTGCCCATCGAGAGCATTGAGGAGGAGGAGGAGGGCCCCATCC
TGCCCTTGAGGAAGAGGTCCCGGCAGGAGGACGAGGCCCCGATCCCCCTCCCTCCGGAGCAGAAGCCGCTCACGGGAAAG
CGGTCGACACGGAAGCCCCCCACGGCCAGGAAGTGCCGCCCACCCTCCTCCCGCCTGAACCAAAGCAGGGCCAGCAAAGG
CAAGCTGACCACGCCGGTGTCGTCCAACGGACGCAGTGCTGCCATCACCACCCCGGGTTTCGCCCCCAGGTTTGATTCCA
GCATCTTCAAGACCCCCGGGCTGCGGGCCCCCGCCTCCCACGAACCCGTCTTCAGCGTCTCCGCCAACGGCAGCCCCTTG
GCCGGCAGCAGCGATGTCTTTGTCACTCTTCCCATCGGCAAAGGGGAGAGCATCCGTGTCAAGGCCAGCGACCTCACGGA
GAAGGACCTCCTGCGCCTGAACCCGTCTGCTCTCGGGAGCATGAAGAAGCTCTCGGCCCAGGTCCTGCGCTTGTGCAAGT
AA

Library Parental gene expression (RPM)
SRP009831_adrenal 2 .00 RPM
SRP009831_brain 0 .33 RPM
SRP009831_dewlap 10 .59 RPM
SRP009831_embryo 79 .52 RPM
SRP009831_heart 0 .93 RPM
SRP009831_liver 4 .50 RPM
SRP009831_lung 1 .96 RPM
SRP009831_ovary 31 .85 RPM
SRP009831_skeletal_muscle 0 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004959 ortholog_one2one 1 retrogene
retro_chof_679,
Callithrix jacchus ENSCJAG00000002008 ortholog_one2one 1 retrogene
retro_cjac_380,
Homo sapiens ENSG00000134690 ortholog_one2one 1 retrogene
retro_hsap_4052,
Gorilla gorilla ENSGGOG00000007719 ortholog_one2one 2 retrogenes
retro_ggor_2594, retro_ggor_2721,
Microcebus murinus ENSMICG00000011926 ortholog_one2one 1 retrogene
retro_mmur_1589,
Macaca mulatta ENSMMUG00000014340 ortholog_one2one 2 retrogenes
retro_mmul_1611, retro_mmul_2339,
Nomascus leucogenys ENSNLEG00000011630 ortholog_one2one 2 retrogenes
retro_nleu_2803, retro_nleu_3006,
Pongo abelii ENSPPYG00000001526 ortholog_one2one 2 retrogenes
retro_pabe_3224, retro_pabe_3234,
Pan troglodytes ENSPTRG00000000552 ortholog_one2one 3 retrogenes
retro_ptro_2531, retro_ptro_2533, retro_ptro_2746,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_139 63.31 54.95
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2. retro_acar_200 65.19 53.24
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Download FASTA sequences of all ENSACAG00000028556 retrocopies