Parental gene:

Bra014819

Aliases:None
Description:AT3G54400 (E=6e-209) | aspartyl protease family protein
Organism:Chinese cabbage (Brassica rapa)
Coordinates:A04:3369061..3372015(+)


>Bra014819
ATGAGAACCCAACTCCTCTTTCTACTCATCTCGCTCTTAGTTTTGAACTCTGAATCACTAAACTGCTATGAAAATAACCC
ACGAGGCCGTCCCTCAGATCTAAGAGTGTTCCATATCAGCAGCCCTTGCTCTCCATTCAAAAAAAAACCAAACACTGTCT
CATGGGAAAGCACACTTCTTCAAGACAAGGCTCGTCTCCAGTATTTGTCAAGCCTCGCCGTGAAATCTTCGGTCCCAATC
GCCTCGGGACGTGCCATCGTTCAGAGCCCGACTTATATCGTGAGGGCTAATATTGGGACACCGGCTCAGCCCATGCTCGT
GGCTCTTGACACTAGCAATGACGCTGCTTGGGTTCCTTGTTCTGGCTGTGTTGGCTGTGCTTCATCTGTTCTCTTTGACC
CTTCCAAGTCAAACTCTTCACGTACTCTTCCATGCGAAGCTCCTCAGTGTAAACAGGCTCCAAATCCAACGTGCACCGTA
AGCAAATCATGTGGTTTCAATATGACTTATGGTGGATCAGCCATCACAGCATCTCTGACACAAGACACACTAACACTAGC
CAGTGACGTCATCCCAAACTACACTTTTGGGTGCATCAACCAAGCCACTGGAACATCGTTGCCAGCGCAAGGACTCATGG
GTTTAGGCCGTGGTCCATTGTCTTTAATCTCACAGACACAGAATCTTTATATGTCCACGTTCTCGTACTGCTTGCCTAAT
AGTAAGTCCAGCAACTTCTCGGGATCGTTAAGATTGGGACCTAAATTTCAACCACTTAGGATCAAGACAACTCCATTGTT
GAAGAACCCTAGGAGGTCCTCGCTTTACTATGTTAACTTGGTTGGGATTCGTGTCGGGAACAAAATTGTTGATATTCCTA
CAAGTGCACTCGCCTTTGACCCAGCCACAGGAGCCGGCACGATCTTTGACTCAGGGACGGTCTTCACGAGGCTAGTCGAA
CCAGCTTACCTTGCCGTAAGAGACGAGTTCAGGCGACGTGTCAAGAACGCAAACGCAACATCACTCGGAGGTTTCGACAC
TTGCTACTCCGGCTCCGTCGTGTTCCCACCTGTCACGTTTATGTTTGCGGGAATGAACGTGACTATACCTCCGGACAATC
TTCTCATCCACAGCTCTTCCGGCAACACCAGCTGCCTCGCCATGGCCGCAGCTCCAAACAACGTTAACTCTGTACTTAAC
GTCATCGCTAGTATGCAGCAGCAGAACCACCGTGTCCTCATCGACGTGCCCAATTCCAGGCTCGGCATTTCCCGTGAAAC
ATGTACCTAA

Species Parental gene accession Homology type Retrogenes number
Medicago truncatula MTR_8g039540 ortholog_many2many 1 retrogene
retro_mtru_20,
Populus trichocarpa POPTR_0001s06560 ortholog_many2many 1 retrogene
retro_ptri_13,
Prunus persica PRUPE_ppa005966mg ortholog_one2many 1 retrogene
retro_pper_11,
Theobroma cacao TCM_045111 ortholog_one2many 1 retrogene
retro_tcac_5,
Vitis vinifera VIT_13s0084g00820 ortholog_one2many 1 retrogene
retro_vvin_28,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_brap_21 54.28 70.16
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all Bra014819 retrocopies