Parental gene:

ORUFI01G24440

Aliases:None
Description:None
Organism:Brownbeard rice (Oryza rufipogon)
Coordinates:1:21343114..21344509(-)


>ORUFI01G24440
ATGGCCGCTGGCGTTGACGGCGACACGGCCGCCGCCGCCGCCGCCGGAGGCGGGGTGGTGGTGGTGTTCGACTTCGACAG
GACCATCATCGAGTGGGACAGCGACGACTGGGTCATCACCAAGCTCGGCGCCTCCGACGCCTTTCGCCGCCTCCGCCCCA
CCATGCGCTGGAACCCCCTCATGGACAGGATGATGGTGGAGCTGCACGCCCAGGGGAGGTCGGCCGACGACATCCGCGAC
TGCCTCAAGAGCGCCCCCCTCGACGCCCACGTCCTCTCCGCCATCACCACGGCCTCGGCATTAGGGTGTGATTTGAGGGT
GGCGAGCGACGCCAACGCCTTCTTCATCGAGACCGTGCTGGAGCACCACGGCGTCCTCGGATGCTTCTCGGAGATCAGCA
CGAACCCGGCGCGCGTCGACGGCAACGGCAGGCTGAGGATCTCGCCGTTCCACGACCCCGACGACAGCTCGCCCCATGGA
TGCAGCCTCTGCCCCGAGAACATGTGCAAGGGCAAGATAATTGAGAGGATTCAGGCGACGGCCAATGGTAAAAGGCATTT
CATCTACATTGGTGATGGCAGAGGAGATTACTGCCCCTCCCTTAAGCTAGGGGAAGGGGACTATGTCATGCCAAAGGAGA
ATTACCCCCTCTGGAATCTCATCAGCAGCAACAAACAGCTTCTCAAGGCCGAGGTTCATCCATGGAATAATGGCGAGGAA
CTCGAACAGACCTTACTTAAGTTGGTCAACAAGTTGATCACCCCACCTGCACAACCATCCCAATTTGAATATAAATGTGA
TATGAGCAATCCAGTATCCACTGAAGTAGGACAGGCTCTTCGTGTGCCACATTAA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA001283 ortholog_one2one 1 retrogene
retro_oind_8,
Brachypodium distachyon BRADI2G42720 ortholog_one2one 1 retrogene
retro_bdis_19,
Zea mays GRMZM2G035134 ortholog_one2many 1 retrogene
retro_zmay_14,
Hordeum vulgare MLOC_52823 ortholog_one2one 1 retrogene
retro_hvul_27,
Oryza brachyantha OB01G31280 ortholog_one2one 1 retrogene
retro_obra_4,
Oryza glumaepatula OGLUM01G25430 ortholog_one2one 1 retrogene
retro_oglu_22,
Oryza meridionalis OMERI01G19970 ortholog_one2one 1 retrogene
retro_omer_22,
Oryza nivara ONIVA01G24910 ortholog_one2one 1 retrogene
retro_oniv_37,
Oryza punctata OPUNC01G21870 ortholog_one2one 1 retrogene
retro_opun_7,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oruf_27 52.43 92.61
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Download FASTA sequences of all ORUFI01G24440 retrocopies