Parental gene:

C20OX2, OBART01G39570

Aliases:None
Description:GA C20oxidase2; SD1 [Source:UniProtKB/TrEMBL;Acc:B6F2E4]
Organism:Oryza barthii
Coordinates:1:32476847..32480004(+)


>OBART01G39570
ATGGTGGCCGAGCACCCCACGCCACCACAGCCGCACCAACCACCGCCCATGGACTCCACCGCCGGCTCTGGCATTGCCGC
CCCGGCGGCGGCGGCGGTGTGCGACCTGAGGATGGAGCCCAAGATCCCGGAGCCATTCGTGTGGCCGAACGGCGACGCGA
GGCCGGCGTCGGCGGCGGAGCTGGACATGCCCGTGGTCGACGTGGGCGTGCTCCGCGACGGCGACGCCGAGGGGCTGCGC
CGCGCCGCGGCGCAGGTGGCCGCCGCGTGCGCCACGCACGGGTTCTTCCAGGTGTCCGGGCACGGCGTCGACGCCGCCCT
GGCGCGCGCCGCGCTCGACGGCGCCAGCGACTTCTTCCGCCTCCCGCTCGCCGAGAAGCGCCGCGCCCGCCGCGTCCCGG
GCACCGTGTCCGGCTACACCAGCGCCCACGCCGACCGCTTCGCCTCCAAGCTCCCGTGGAAGGAGACCCTCTCCTTCGGC
TTCCACGACCGCGCCGCCGCCCCCGTCGTCGCCGACTACTTCTCCAGCACCCTCGGCCCCGACTTCGCGCCAATGGGGAG
GGTGTACCAGAAGTACTGCGAGGAGATGAAGGAGCTGTCGCTGACGATCATGGAGCTCCTGGAGCTGAGCCTGGGCGTGG
AGCGAGGCTACTACAGGGAGTTCTTCGCGGACAGCAGCTCAATCATGCGGTGCAACTACTACCCGCCATGCCCGGAGCCG
GAGCGGACGCTCGGCACGGGCCCGCACTGCGACCCCACCGCCCTCACCATCCTCCTCCAGGACGACGTCGGCGGCCTCGA
GGTCCTCGTCGACGGCGAATGGCGCCCCGTCAGCCCCGTCCCCGGCGCCATGGTCATCAACATCGGCGACACCTTCATGG
CGCTGTCGAACGGGAGGTATAAGAGCTGCCTGCACAGGGCGGTGGTGAACCAGCGGCGGGAGCGGCGGTCGCTGGCGTTC
TTCCTGTGCCCGCGGGAGGACAGGGTGGTGCGGCCGCCGCCGAGCGCCGCCACGCCGCGGCACTACCCGGACTTCACCTG
GGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACCCGCACGCTCGACGCCTTCACGCGCTGGCTCGCGC
CGCCGGCCGCCGACGCCGCCGCGACGGCGCAGGTCGAGGCGGCCAGCTGA

Species Parental gene accession Homology type Retrogenes number
Leersia perrieri LPERR01G34060 ortholog_one2one 1 retrogene
retro_lper_3,
Oryza meridionalis OMERI01G36440 ortholog_one2one 1 retrogene
retro_omer_11,
Oryza glaberrima ORGLA01G0334700 ortholog_one2one 1 retrogene
retro_ogla_32,
Oryza sativa japonica OS01G0883800 ortholog_one2one 1 retrogene
retro_osat_2,
Setaria italica Si001573m.g ortholog_one2one 1 retrogene
retro_sita_29,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_obar_12 53.20 85.86
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all OBART01G39570 retrocopies