Parental gene:

RPS3A, ENSTTRG00000013094

Aliases:None
Description:ribosomal protein S3A [Source:HGNC Symbol;Acc:10421]
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_115146:24702..29178(+)


>ENSTTRG00000013094
GTTGACCCATTTTCTAAGAAAGATTGGTATGATGTGAAAGCACCAGCTATGTTCAATATAAGAAATATTGGGAAAACACT
AGTCACGAGAACTCAAGGAACCAAAATCGCATCTGATGGCCTCAAGGGTCGTGTGTTTGAAGTGAGCCTTGCTGATCTGC
AGAATGATGAAGTTGCATTTAGAAAATTCAAGCTTATTACTGAGGATGTTCAGGGCAAAAACTGCCTGACTAATTTCCAT
GGCATGGATCTTACCCGTGACAAAATGTGCTCCATGGTCAAAAAATGGCAGACCATGATTGAAGCTCATGTTGATGTCAA
GACTACCGATGGTTATTTGCTTCGTCTCTTCTGTGTGGGTTTTACTAAAAAACGCAACAATCAGATTCGGAAGACCTCTT
ATGCCCAGCACCAGCAGGTCCGCCAGATCCGCAAGAAGATGATGGAAATCATGACCCGAGAGGTGCAGACAAATGACTTG
AAAGAGGTGGTCAATAAATTGATTCCAGACAGCATTGGAAAAGACATAGAAAAGGCCTGCCAATCTATTTATCCACTCCA
TGATGTCTTTGTTAGAAAAGTAAAAATGCTGAAGAAGCCCAAGTTTGAATTGGGAAAACTCATGGAGCTACATGGTGAAG
GTAGTAGTTCTGGAAAAGCTACTGGGGACGAGACAGGTGCTAAAGTTGAACGAGCTGATGGATATGAGCCACCAGTCCAG
GAATCTGTTTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007238 ortholog_one2one 34 retrogenes
retro_chof_1076, retro_chof_1092, retro_chof_1207, retro_chof_126, retro_chof_1309, retro_chof_1311, retro_chof_1341, retro_chof_1362, retro_chof_1377, retro_chof_1393, retro_chof_1395, retro_chof_1441, retro_chof_1488, retro_chof_1490, retro_chof_1598, retro_chof_1626, retro_chof_2056, retro_chof_2179, retro_chof_220, retro_chof_2201, retro_chof_2282, retro_chof_2417, retro_chof_2465, retro_chof_2500, retro_chof_2613, retro_chof_2628, retro_chof_2635, retro_chof_2668, retro_chof_342, retro_chof_370, retro_chof_685, retro_chof_824, retro_chof_826, retro_chof_912,
Macaca mulatta ENSMMUG00000021821 possible_ortholog 1 retrogene
retro_mmul_2297,
Monodelphis domestica ENSMODG00000000969 ortholog_one2one 6 retrogenes
retro_mdom_1040, retro_mdom_1229, retro_mdom_1396, retro_mdom_1480, retro_mdom_627, retro_mdom_694,
Mus musculus ENSMUSG00000028081 possible_ortholog 2 retrogenes
retro_mmus_218, retro_mmus_254,
Rattus norvegicus ENSRNOG00000011893 possible_ortholog 1 retrogene
retro_rnor_198,
Sarcophilus harrisii ENSSHAG00000015088 ortholog_one2many 2 retrogenes
retro_shar_777, retro_shar_95,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_101 87.69 53.50
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2. retro_ttru_170 72.66 52.67
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3. retro_ttru_263 94.05 69.14
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4. retro_ttru_319 88.76 69.14
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5. retro_ttru_779 95.63 82.72
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6. retro_ttru_940 78.46 52.67
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7. retro_ttru_1014 78.51 91.77
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8. retro_ttru_1456 93.83 100.00
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9. retro_ttru_1789 82.76 82.72
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10. retro_ttru_1945 93.85 100.00
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Download FASTA sequences of all ENSTTRG00000013094 retrocopies