Parental gene:

LETM1, ENSSTOG00000014167

Aliases:None
Description:leucine zipper-EF-hand containing transmembrane protein 1 [Source:HGNC Symbol;Acc:6556]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393287.1:21550120..21587401(+)


>ENSSTOG00000014167
ATGGCGTCCATCTTGCTGAGAAGCTGTCGCGGCCGGGGCCCAGCGCTCCTCCCGCCGCCCCGCGCCGCAGCCTCGCGGGG
TAGTCTGGGGCACCGGCATCGTGCTTGTCTCAGTTGTGCCAGCACTGTGGGGCTGATAAGCCGCTCGAATATTTCATCTG
GCTGCTGCTTTCCAGCCCACCCTGTGTACCTCTGCTTCAGAGATGAGCCCCTCAGTGTTTGGACTTTGAGGCCCAAGCAC
CCACGCACAGCAGTGAGAGTGCCATGGACCCCCACTTCAGCAGGCTTGGTTGTTACAGGACCTCGGTACCTTTCTATGCG
AGGCTGGCACTCATCACCCCCTCTTAGTGATGACTCTGTGGTGGAGAAGTCCCTCAAATCCTTAAAGGACAAGAATAAGA
AGCTGGAGGAGGGTGGCCCTGTGTACAGCCCACCAGCTGAGGTGGTGGTGAAGAAGTCTCTTGGGCAGAAGGTGTTGGAT
GAGCTGAAGCATTACTACCATGGCTTCCGTTTGCTCTGGATCGATACCAAGATTGCAGCACGCATGCTGTGGCGCATCCT
CAATGGCCACACCCTGACCCGCCGGGAGCGCAGGCAGTTTCTCCGGATCTGTGCTGACCTCTTCAGACTGGTCCCTTTCC
TGGTCTTCGTGGTGGTGCCCTTTATGGAATTTCTGCTGCCTGTGGCCGTGAAGCTCTTCCCCAACATGCTGCCATCCACC
TTTGAGACCCAGTCCATCAAGGAGGAGAGGCTGAAGAAGGAGCTACGGGTCAAGCTGGAGCTGGCCAAGTTCCTACAAGA
CACTATTGAGGAGATGGCCCTGAAGAACAAGGCAGCCAAGGGAAACGCCACCAAAGACTTCTCTGCATTTTTCCAGAAGA
TCCGGGAGACAGGAGAAAGACCCAGCAATGAGGAAATCATGCGGTTTTCCAAATTGTTTGAGGATGAGCTGACTCTGGAT
AACCTCACACGACCACAACTGGTGGCACTGTGCAGGCTGCTGGAACTCCAATCCATCGGCACCAACAACTTTCTGCGCTT
CCAGCTCACCATGAGGCTGAGGTCCATAAAGGCTGATGACAAGCTGATTGCTGAGGAAGGGGTGGACAGCCTGAACGTCA
AGGAACTGCAGGCAGCGTGTCGGGCGCGAGGCATGCGGGCCCTTGGCGTCACAGAAGAACGTTTGCGGGGACAGTTGAAG
CAGTGGCTGGACCTGCACCTGCACCACGAGATCCCCACGTCACTGCTCATCCTGTCCCGTGCCATGTACCTCCCAGACAC
TCTCTCGCCTGCTGACCAGCTCAAATCCACACTGCAAACCCTCCCGGAAATTGTGGCAAAGGAAGCCCAGATGAAGGTGG
CAGAGGTGGAGGGTGAGCAGGTGGACAACAAAGTAAAACTGGAGGCCACGCTGCAGGAAGAGGCCGCCATCCAGCAGGAG
CACCGGGAGAAGGAACTGCAGAGGGCCGCAGAGGCAGCAAAGGACATTGAGCTGGAAGGAGTGGAAGCTGCCACCCCTGG
GAGGCCAGTGGTTGAGCCAAAGCCAGAGGTGCCTGATGTGATCCTGCCCACAGAGGCCCTGAAGGATATTGCTCCAGTGC
TAGAGGGTGTGAAGGAAGAGGAAATAACTCAGGAAGAAATTGATGTCCTCAGTGACGCTTGCTCCAAGCTGCAGGAGCAG
AAGTCATCTCTGACCAAGGAAAAGGAGGAACTGGAGCTGCTGAAAGAGGACGTCCAGGACTACAATGAGGACTTGCAAGA
GATCAAGAAGGAGCTTTCTAAGACCGGTGAAGAAGAATTAGTGGAAGAATCTAAAGCCAGCAAGAGACTAACAAAGCGTG
TGCAGCAGATGATTGGGCAGATCGATGGCCTGATTGCACAGCTAGAGACGGGTCAGCAGGCCGGCAAGCTGGGCCCTGCC
CAGGGCTCAGCTGTGGGGGAGAATGTTGTCAGCGTCACTGAGCTCATCAACGCCATGAAGCAAATCAAGCACATTCCAGA
AAGCAAGCTGGTGAGCTTGGCCTCAGCACTGGATGAAAACAAGGATGGCAAGGTCAACATCGATGACCTCGTCAAGGTTA
TCGAGCTGGTGGACAAAGAAGATGTCCACATCTCCACTAGCCAGGTGGCTGAGATTGTGGCCGTGCTGGAGAAGGAGGAG
AAGGTGGAAGAGAAGGAGAAGGCCAAGGGCAAGGCTGAGAAGGAGGCTGCAGAGGTGAAGAACTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001859 ortholog_one2one 1 retrogene
retro_cjac_1529,
Homo sapiens ENSG00000168924 ortholog_one2one 1 retrogene
retro_hsap_2019,
Gorilla gorilla ENSGGOG00000002923 ortholog_one2one 2 retrogenes
retro_ggor_1158, retro_ggor_1159,
Nomascus leucogenys ENSNLEG00000000067 ortholog_one2one 2 retrogenes
retro_nleu_1752, retro_nleu_2731,
Otolemur garnettii ENSOGAG00000014883 ortholog_one2one 1 retrogene
retro_ogar_20,
Pongo abelii ENSPPYG00000014533 ortholog_one2one 1 retrogene
retro_pabe_1655,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_160 72.82 55.60
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Download FASTA sequences of all ENSSTOG00000014167 retrocopies