Parental gene: | IFRD2, ENSSSCG00000024363 |
| Aliases: | None |
| Description: | interferon-related developmental regulator 2 [Source:HGNC Symbol;Acc:5457] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 13:35932515..35968835(-) |
>ENSSSCG00000024363
ATGCCCCGCGCCCGAAAGGGCAACGCGCCCCGCAGAGGCGGCCAGCGCCGCGGAGGAGGTGCCCGGAGCAGTACCCAAGC
TGACTCAGGTTCCAGCGAGGATGAGGCAGCCAGTGAGGCTCGCAGCACCACCAGTGAATGCCCCAGCCTCTTGAGCACCG
CTGCAGAGGAAGGCCTTGGGGGGGATGCCGTGGATGAGCAGGGTCAGCAGGAAGACCTTGAGGAGAAGTTGAAGGAGTAT
GTGGACTGCCTCACAGACAAGAGCAGTGCCAAGACCCGGCAGGGTGCTCTTGAGAGCCTGCGCTTGGCCCTGGCAGCTCA
CCTACTTCCCGACTTCTTGCTGGAACGCTGCCTCACACTGGCTGATGCCTTGGAAAAGTGCCTCAAGAAAGGGAAGGGCG
AGGAACAGGCCCTGGCCGCTGCCGTGCTAGGTCTGCTGTGTGTGCAGCTGGGCCCTGGACCCAAGGGAGAGGAGTTATTC
CACAGCCTGCAGCCCCTGCTGGTCTCTGTGCTCACTGATGGCACAGCTAGCCCTGCTGCCCGGCTCCACTGCGCTTCTGC
TCTTGGCTTGGGCTGCTACGTGGCTGCTGCCGATGTACAGGACCTGGTCTCTTGCCTCACCTGTCTGGAAGGTGTTTTCA
GCCGGTCCTGTGGTGTGGGTGGCGCCACAGCTCCTATGGTCCCTACCAGCCTGCATGGCCTGCTCTGTGCTGCCCTGCAG
GCCTGGGCATTGCTACTTACCATCTGCCCCAGCACCCACATCAGTCACATCTTGGACAGGCAGCTGCCCCAGCTGCCCCA
GCTCTTATCCAGTGAAAGCGTGAACCTGCGGATTGCTGCTGGAGAGACCATCGCACTGCTCTTTGAACTGGCCCGGGACC
TTGAGGAGGACTTCATTTATGAGGACATGGAGGCCCTCTGCGGTGCGCTGCGCACTCTGGCCACCGATAGCAACAAGTAT
CGTGCCAAGGCTGACCGCCGGCGCCAGCGCTCGACCTTCCGCTCTGTGCTGCACTTTGTTGAGGGCGGCGAGTGTGAGGA
AGAGACAGTCCGCTTTGGGCTCGAGGTGCTCTATGTGGACAGCTGGGCTCGGCGCCGGATCTACGCTGCCTTCAAGGATG
TGCTGGGTTCTGGCATGCACCACCACCTCCAGAACAATGAGCTACTCCGTGACATCTTTGGCCTGGGCCCTGTGCTGGTA
CTGGATGCCACTGCCCTGAAGGCCTGCAAAATCTCACGTTTTGAGAAGCACCTGTACAACGCTGCTTCCTTCAAAGCCAG
GACCAAGGCTCGCAGCCGTGTGCGGGACAAGCGGGCAGACATCCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 51 .50 RPM |
| SRP014902_testis | 65 .07 RPM |
| SRP018288_heart | 36 .83 RPM |
| SRP018288_kidney | 46 .20 RPM |
| SRP018288_liver | 43 .18 RPM |
| SRP018288_lung | 22 .30 RPM |
| SRP018856_adipose | 41 .01 RPM |
| SRP035408_brain | 14 .01 RPM |
| SRP035408_liver | 15 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004993 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020119 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012534 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_445 | 73.24 | 79.64 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000024363 retrocopies