Parental gene:

GTF2E2, ENSSSCG00000015845

Aliases:None
Description:general transcription factor IIE, polypeptide 2, beta 34kDa [Source:HGNC Symbol;Acc:4651]
Organism:Pig (Sus scrofa)
Coordinates:15:61816693..61920619(+)


>ENSSSCG00000015845
ATGAAGACACGGCATCAGCGAGGAGATACACATCCTCTTACTTTAGAAGAAATTTTGGATGAAACACAACATTTAGATAT
TGGACTTAAGCAGAAACAATGGTTAATGACTGAGGCGTTAGTCAATAATCCCAAAATTGAAGTAATAGATGGAAAGTATG
CCTTCAAGCCCAAGTACAACTTGAAAGATAAGAAGGCCCTACTTAGGCTCTTAGATAAACATGACCAGCGAGGCCTAGGA
GGAATTCTTTTAGAAGACATAGAGGAAGGACTCCCCAATTCCCAGAAAGCCGTCAAGGCTTTAGGGGACCAGATACTATT
TGTAAATCGTCCTGATAAGAAGAAAATTCTTTTCTTCAATGATAAAAGCTGTCAGTTTTCTGTGGATGAAGGCACAGAGT
TTCAGAAACTGTGGAGGAGTGTCACCGTGGATTCAATGGATGAGGAGAAAATTGAAGAGTATCTGAAGCGACAGGGTATT
TCTTCCATGCAGGAATCCGGACCAAAGAAAGTGGCCCCTATTCAGAGAAGGAAGAAGCCTGCTTCTCAGAAAAAGCGACG
GTTTAAGACTCACAATGAGCACTTGGCTGGGGTGCTGAAGGACTACTCAGACATTGCGCCTGGCAAGTAG

Library Parental gene expression (RPM)
SRP014902_placenta 15 .13 RPM
SRP014902_testis 36 .63 RPM
SRP018288_heart 40 .47 RPM
SRP018288_kidney 32 .31 RPM
SRP018288_liver 17 .11 RPM
SRP018288_lung 40 .93 RPM
SRP018856_adipose 55 .18 RPM
SRP035408_brain 62 .00 RPM
SRP035408_liver 32 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000005031 ortholog_one2one 1 retrogene
retro_dnov_2321,
Macropus eugenii ENSMEUG00000010541 ortholog_one2one 1 retrogene
retro_meug_546,
Myotis lucifugus ENSMLUG00000007814 ortholog_one2one 1 retrogene
retro_mluc_2029,
Sorex araneus ENSSARG00000007758 ortholog_one2one 2 retrogenes
retro_sara_376, retro_sara_569,
Tarsius syrichta ENSTSYG00000013143 ortholog_one2one 1 retrogene
retro_tsyr_2074,
Tursiops truncatus ENSTTRG00000012464 ortholog_one2one 1 retrogene
retro_ttru_859,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_878 82.03 60.29
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Download FASTA sequences of all ENSSSCG00000015845 retrocopies