Parental gene: | PROSC, ENSSSCG00000015826 |
| Aliases: | None |
| Description: | proline synthetase co-transcribed homolog (bacterial) [Source:HGNC Symbol;Acc:9457] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 15:55741204..55752950(-) |
>ENSSSCG00000015826
ATGTGGAAGGCTGGCAGCATGTCGGCGGAGCTGGGAATCGGTTTCGCTCTGCGGGCAGTGAATGAGCGCGTGCAGCAGGC
GGTGGCGCGACGGCCGCGGGAACTCCCCGCCATCCAGCCCCGGCTCGTAGCGGTCAGCAAGACCAAGCCTGCAGACATGG
TGATCGAGGCCTACAATCACGGCCAGCGCATTTTCGGGGAGAACTACGTTCAAGAACTGCTCGAAAAAGCCTCAAACCCT
AAAATTCTGTCTTCGTGTCCTGAGATCAAATGGCACTTCATTGGCCATCTCCAGAAACAAAATGTCAACAAATTGATGGC
TGTCCCCAATCTTTTCATGCTGGAAACGGTGGATTCTATGAAGCTGGCTGACAAGGTTAACAGTTCGTGGCAGAAAAAAG
GTTCTCCTGAAAGGTTAAAGGTCATGGTCCAGGTTAACACCAGTGGAGAGGAAAGCAAACATGGCCTGCTCCCTTCAGAG
ACAGTGGCCATGGTAGAACACGTGAAAGCCAAGTGCCCCAGCCTGGAGTTCGTGGGGCTGATGACCATCGGAAGCTTTGG
GCATGATCTTAGTCAAGGACCAAATCCAGACTTCCAGGTGTTAGTGTCCCTCCGGGAGGAGCTGTGTCAGAAGCTGCACA
TCCCTGTTGACCAGGTGGAGCTGAGCATGGGCATGTCTGTGGACTTCCAGCACGCAATTGAAGTAGGATCTACAAATGTC
CGAATTGGAAGCACTATTTTTGGAGAGCGTGATTACTCCAAGAAAGCTGCCCTGGACAAGCCCACAGCGGAGCTGAAGGC
CCCAGTAGAAATGGCCCAGGCACACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 18 .85 RPM |
| SRP014902_testis | 28 .15 RPM |
| SRP018288_heart | 29 .91 RPM |
| SRP018288_kidney | 41 .18 RPM |
| SRP018288_liver | 41 .42 RPM |
| SRP018288_lung | 43 .28 RPM |
| SRP018856_adipose | 44 .79 RPM |
| SRP035408_brain | 27 .92 RPM |
| SRP035408_liver | 24 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000006193 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016940 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_347 | 74.88 | 72.73 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000015826 retrocopies