Parental gene: | RPS28, ENSSSCG00000013597 |
| Aliases: | None |
| Description: | Sus scrofa ribosomal protein S28 (RPS28), mRNA. [Source:RefSeq mRNA;Acc:NM_001001587] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 2:71320355..71321505(-) |
>ENSSSCG00000013597
ATGGACACGAGCCGTGTGCAGCCCATCAAGCTCGCCAGGGTTACCAAGGTTCTGGGCAGGACAGGTTCGCAGGGACAGTG
CACGCAGGTGCGGGTAGAATTCATGGACGATACGAGTCGTTCCATCATCCGAAACGTGAAAGGCCCTGTTCGTGAGGGTG
ATGTGCTCACCCTTTTGGAGTCAGAGCGAGAGGCTCGGAGGCTGCGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 706 .39 RPM |
| SRP014902_testis | 1306 .26 RPM |
| SRP018288_heart | 245 .80 RPM |
| SRP018288_kidney | 368 .02 RPM |
| SRP018288_liver | 300 .95 RPM |
| SRP018288_lung | 61 .40 RPM |
| SRP018856_adipose | 1019 .51 RPM |
| SRP035408_brain | 179 .83 RPM |
| SRP035408_liver | 109 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004917 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000024931 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000029923 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000028895 | possible_ortholog | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000003890 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000067288 | ortholog_one2many | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000021484 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000042886 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_132 | 63.24 | 98.55 | Please wait, loading  |
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| 2. | retro_sscr_191 | 69.57 | 100.00 | Please wait, loading |
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| 3. | retro_sscr_808 | 76.12 | 97.10 | Please wait, loading |
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Download FASTA sequences of all ENSSSCG00000013597 retrocopies