Parental gene:

MOSPD1, ENSSSCG00000012686

Aliases:None
Description:motile sperm domain containing 1 [Source:HGNC Symbol;Acc:25235]
Organism:Pig (Sus scrofa)
Coordinates:X:126558347..126582412(-)


>ENSSSCG00000012686
ATGCATCAACAAAAAAGACAGCCAGAGTTAGTGGAAGGAAATCTTCCCGTTTTCGTGTTTCCCACGGAGCTAATATTTTA
TGCAGATGACCAGTCAACACATAAACAAGTGTTGACTCTGTATAATCCTTATGAGTTTGCCTTAAAGTTCAAAGTTTTGT
GTACTACTCCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATTGTGATTCGT
CACAGAGACGTTCGATCCTGTCACTATGGTGTGATAGACAAATTCCGTCTCCAAGTGTCTGAGCAGAGCCAGAGGAAGGC
GCTAGGAAGGAAGGAGGTTGTGGCTACTCTCCTCCCGTCGGCAAAAGAACAACAAAAGGAAGAAGAGGAAAAAAGAATAA
AGGAACATTTAACTGAGAGTTTATTTTTTGAGCAGTCGTTTCAACCAGAAAACAGAACTGTCTCCTCAGGACCCAGTTTA
CTGACCGTCTTCCTGGGAGTGGTGTGTATTGCAGCTCTGATGCTTCCTACGCTGGGGGACGTGGAATCGCTGGTGCCTCT
CTACCTCCACTTAAGTGTGAATCAGAAATTAGTGGCTGCTTATATCTTAGGTCTTATCACAATGGCTATACTTAGAACAT
GA

Library Parental gene expression (RPM)
SRP014902_placenta 29 .47 RPM
SRP014902_testis 15 .98 RPM
SRP018288_heart 10 .22 RPM
SRP018288_kidney 33 .00 RPM
SRP018288_liver 57 .57 RPM
SRP018288_lung 12 .02 RPM
SRP018856_adipose 19 .06 RPM
SRP035408_brain 10 .35 RPM
SRP035408_liver 80 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001304 ortholog_one2one 1 retrogene
retro_amel_683,
Choloepus hoffmanni ENSCHOG00000007386 ortholog_one2one 5 retrogenes
retro_chof_1202, retro_chof_1623, retro_chof_201, retro_chof_2295, retro_chof_675,
Dasypus novemcinctus ENSDNOG00000013117 ortholog_one2one 4 retrogenes
retro_dnov_1825, retro_dnov_2650, retro_dnov_2660, retro_dnov_926,
Macaca mulatta ENSMMUG00000022505 ortholog_one2many 1 retrogene
retro_mmul_133,
Monodelphis domestica ENSMODG00000015178 ortholog_one2many 1 retrogene
retro_mdom_159,
Mus musculus ENSMUSG00000023074 ortholog_one2one 1 retrogene
retro_mmus_291,
Otolemur garnettii ENSOGAG00000005739 ortholog_one2one 2 retrogenes
retro_ogar_2508, retro_ogar_528,
Sarcophilus harrisii ENSSHAG00000011544 ortholog_one2many 1 retrogene
retro_shar_21,
Ictidomys tridecemlineatus ENSSTOG00000008152 ortholog_one2one 1 retrogene
retro_itri_1303,
Tarsius syrichta ENSTSYG00000006102 ortholog_one2one 1 retrogene
retro_tsyr_1785,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_690 74.05 61.50
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Download FASTA sequences of all ENSSSCG00000012686 retrocopies