Parental gene: | SNAPC3, ENSSSCG00000005184 |
| Aliases: | None |
| Description: | small nuclear RNA activating complex, polypeptide 3, 50kDa [Source:HGNC Symbol;Acc:11136] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 1:231027869..231060757(-) |
>ENSSSCG00000005184
ATGGCTGAAGGCAGTCGGGGCGGTCCAGCGTGCGGCAGGATGGAGGACAGACAAGACCCGGCCCCCAGCAGTGGTGGCTG
CGGCTTTCCAGAGTACGAGCTTCCTGAGCTAAACACACGCGCTTTCCACGTGGGCGCTTTTGGGGAGCTGTGGCGCTGCC
GACTGCGCGGAAAAGGGGACTTGTCGCTGAAGGAGCCTCCGGCACCCGCGGTGCCCGAGGGCGACACGGTCGCCGACTCC
GGCCGGGAGGATGCTGCCGTGGCCCGGGATCTGGGCTGCAGCCTGGAAGCGGCAGCAGAGCTAAGGGCGGTGTGCGGCCT
TGATAAACTGAAGTGCCTTGAGGAAGGGGAGGATCCAGAAGTCATCCCAGAGAATACCGACCTAGTGACTTTGGGGGTTA
GAAAGAGGCTTCTGGAACATCGGAAAGAAACCATAACGATAGATCGGGTCTGCAGACAAGAAACATTTGCTTATGAGATG
GAATCACATGCCATGGGGAAAAAGCCTGAAAATCCAGCAGACATGATTGAAGAAGGAGAACTTATCCTATCTGTGAATAT
CTTGTACCCTGTTATATTTCATAAGCACAAAGAACACAAACCATACCAGACGATACTGGTACTGGGCAGTCAGAAGCTCA
CGGAACTAAGAGATGCAATTTGCTGTGTTAGTGACCTCCAGATTGGTGGGGAATTCAGCAACACTCCTGATCAAGCACCT
GAACACATCAGCAAAGACCTATACAAATCAGCCTTCTTTTATTTTGAAGGAACATTTTACAATGATAAAAGATACCCTGA
GTGCAGAGATTTGAGCAGAACCATCATTGAGTGGTCGGAGTCCCATGATAGAGGCTATGGAAAGTTTCAGACTGCCAAGA
TGGAAGATTTCACCTTCAATGACTTGTATATTAAACTGGGCTTTCCTTATTTATACTGTCACCAGGGAGATTGTGAACAT
GTTGTTGTCATTACCGACATAAGGCTTGTGCATCATGATGACTGCTTGGATAGGACACTTTATCCCCTTCTTATCAAGAA
GCATTGGCTCTGGACCAGAAAATGTTTCGTTTGTAAAATGTATACAGCTAGATGGGTGACGAACAATGACAGTTTTGCAC
CAGAGGACCCATGTTTCTTTTGTGATGTTTGCTTCCGAATGCTCCACTATGATTCAGAAGGCAACAAACTGGGGGAATTC
CTCGCTTATCCTTATGTTGATCCTGGAACCTTTAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 1 .86 RPM |
| SRP014902_testis | 7 .21 RPM |
| SRP018288_heart | 10 .84 RPM |
| SRP018288_kidney | 9 .46 RPM |
| SRP018288_liver | 4 .64 RPM |
| SRP018288_lung | 5 .70 RPM |
| SRP018856_adipose | 8 .18 RPM |
| SRP035408_brain | 15 .44 RPM |
| SRP035408_liver | 2 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000017214 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_964 | 76.31 | 58.50 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000005184 retrocopies