Parental gene: | ENSSSCG00000003679 |
| Aliases: | None |
| Description: | None |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 6:91811522..91941663(+) |
>ENSSSCG00000003679
ATGTTGACGCCACTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACGTATTTAACAGACAAATGGTGGCCCGGAGTCT
GCTGGATACCCTGAGGGAAGTCTGTGATGATGAAAGAGATTGTGTGGCTGTTTTGGAAAGAATTAGCAGATTAGCTGATG
ACTCAGAGCCGACCGTGCGAGCAGAGCTGATGGAGCAGGTGCCGCACATTGCCCTATTTTGTCAAGAAAACCGGCCCGCC
ATCCCGTATGCCTTTTCCAAATACCTACTGCCCATTGTGGTGCGGTATCTGGCAGATCAGAACAATCAGGTAAGAAAAAC
GAGTCAGGCGGCCTTGTTGGCGCTGCTTGAGCAGGAGTTAATCGAGCGGTTCGATGTGGAGACCAAGGTATGCCCCGTGC
TTGTCGAGCTGACTGCCCCGGACAGCAACGACGACGTGAAGACAGAAGCTGTGGCCATAATGTGCAAAATGGCTCCCATG
GTTGGGAAGGACATCACAGAACGTCTTATCCTCCCCCGGTTTTGTGAGATGTGCTGCGACTGCAGGATGTTTCATGTTCG
AAAGGTCTGTGCTGCCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAGCAAGCTACTGAGGAAATGCTGTTGCCCAGGT
TTTTCCAGCTTTGCTCTGATAATGTGTGGGGAGTCCGCAAGGCTTGTGCCGAGTGCTTCATGGCGGTTTCATGTGCAACA
TGTCAAGAAATTCGACGGACTAAATTATCAGCACTATTTATTAATTTGATCAGCGATCCTTCACGTTGGGTCCGCCAAGC
AGCTTTTCAGTCTCTGGGACCTTTCATATCTACTTTTGCTAATCCATCTAGCTCAGGCCAGTATTTTAAAGAAGAAAACA
AAAGTTCAGAAGATACATCAGTAGAAGACAAAAATAGGATCAGAGACCACGAGGCCCTGGAGGATGCAGAACTCAGGCCA
GAGGAAGCTCCTGCAGTGCCGGCTGTTAGCGCCAGTGTGGAGCTGGAGGGCACAATGACAGGAGGGGCCGAGAGCCCTAG
GCAGCCCCCCGGGGAAACGGGTGCCCCACTCTCTGCCTCGTCCTCAGAAGCCCAGCCAGAGGCCGCCAGCAACGAAGGGG
ACGGAAAGCCTGGGAACTGCGGGTCTGTGTCGCTGTCAGAGGGGAGCTTCAGCGCACAGGATCCGGCCCTCCCAGACCAG
GACTTGTTCAACTCCTTCCACTTCTGGAGGACTCCGCTCCCCAACATCGATCTGGACATGGAGCTGGAGCAGGGCACTGG
GGGCACGCCCAGCCCTGAGGGAGCTGAAGAGACGCCCGAAGTCCCTGGCCCCATTTCTGCCAACATCACCATGGCCACCA
GGAAGGAGCTTGAGGAGATGATAGAAAACCTCGAGCCACACATCGATGACCCCGACGTGAAAGCGCAGGTGGACGTGCTG
GCCGCTGCCCTGCGCGCCTCCAGCCTGGATGCCCGCGACGAGGCCTCTGAAGCCACCAGGAGGGCCACTCAGGACGAGCC
GGCTACTGGCGAGCCCCCTGGCTGTGGACTGGGCCACGATGCCACCGGGCCACTCATCAGCGATGCTGTTGAGACCCTGG
ACTCCGCCCTGTGCTACATTCGAGATGATTCGGACTTGAGCAGCAACAGCGGTTTTAGTCCTGATGAGGAAAGGCGATCT
AAAGTGCAGGTAAGTGACCAGAAATGCTGTATTTTGGGTGGGTGTCGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 53 .09 RPM |
| SRP014902_testis | 68 .32 RPM |
| SRP018288_heart | 5 .92 RPM |
| SRP018288_kidney | 16 .45 RPM |
| SRP018288_liver | 3 .04 RPM |
| SRP018288_lung | 21 .89 RPM |
| SRP018856_adipose | 21 .41 RPM |
| SRP035408_brain | 4 .07 RPM |
| SRP035408_liver | 3 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000061950 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000024561 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_694 | 64.57 | 81.08 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000003679 retrocopies