Parental gene: | PADI6, ENSSSCG00000003484 |
| Aliases: | None |
| Description: | None |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 6:70316205..70333698(+) |
>ENSSSCG00000003484
ATGTCGTTTCAGAGCATCATCCATCTGTCCCTGGACAGCCCTGTCCATTCCACTTGCATGTTGGGAATGGAAATCTGCTT
AGATCTCAGTGGGTGTGCCCCACAGAAGTGCGAGTCCTTCACCATCGCTAGCTCTCCGGGGGTCCTGGTTGATATCTACA
ACGTTGCGTCTGGGAAGGTCACGCAGGAGGCTGCCCTGACCCAGTGGCCCCTGTCACATCCCATGGATGTGCTGGTGAAG
ATGACATCCCCGAGCTCCGATGTCAACGGGGACAAGGTTTTGGTCTCCTACTTCCTGCCCCATGAGGATGTCCCTGTAGC
CACAGCTATACTCTATCTCACTGGCATAGAAGTCTCTCTGGACGTGGATATCTACCGCAATGGGGACGTCGAGATGGCAA
ATGACAAACAGGCTAAGAAAAACTGGGTCTGGGGCCCCGATGGCTGGGGCGCCATCCTGCTTGTGAACTGCGCCCTGACC
AACCGGGGCCAGATTAAGGACGGGAAGATCACAAAGGTGTTCTCTGCGGAGGATATAAGGAATCTGTCCCCGATGGTGCT
GAGAGTTCAGGGGCCCAGCTGCATTTTAAAGAAACACCGGCTGCTGCTCCACACCTCCAAGGAAGAGTCGGACAAGGCGA
GAGTCTACCGGCCACAAAAGGACAGTTCCAGCACATTCGAGTTGGTGCTGGGCCCAGGGCAGCACGCCTATGCCTTGGGT
CCCCTCGAAAGCGACTTGAAGGAGACCTTCTACGTGGAAGCCCTGCAGTTCCCGTCCGGCAGCTTCCCAGGCCTGATTTC
CTACTCGGTCTCCCTGGTGGAAGAGTCTAAAGACGGGATAGGACCTCAGATCCTGGTGTACAAGGACACGGTGGTGTTCC
GGGTGGCCCCCTGCATCTTTACCCCCAGCACGCAGATGCCCCTGGAGATGTACGTCTGCAGAGAGCTGCAGGTCCAGGGC
TTTGTGAATGCGGTGACGGAGCTGAGCGAGAGGAGTAACAGCCAGGTGGCATCCGTCTATGAAGACCCCAACCGCTTGGG
CAGGTGGCTCCAGGATGAGATGGCCTTCTGCTACACCCAGGCTCCCCACAAGACCACTGCCTTGGTCCTGGACACCCCTC
GGGTCACCAAGCTCGAGGACTTCCCCATGAGATACTCACTGAGCCCTGGGATCGGCTACGTGACCCTGAACACCCTGGAC
CACACCGTGGCCAGTATAGACTCCATCGGGAACCTGATGGTGTCCCCGCCTGTCAAGGTCAAGGGGAAAGAGTACCCTCT
AGGCAGGATCCTCATTGGCAGCAGCTTTTACCCCAGCAAGGATGGCCGGGACATGAGTAAGGCCCTCCGGGACTTCCTCT
ACGCCCAGCAAGTCCAGGCCCCAGTGGAACTCTTCTCCGACTGGCTGATGATCGGCCACATCTATGAGTTCATGTGCTTC
ATCCCCACACAGTTCAAAGTGGAGGGCAAAAAGGACTTCCGGCTGCTCCTGGCCAGCCCCAGCACCTGCTATAAGCTGTT
CACGGAGAAACAGAAGCAGGGCTATGGAGATGCAGCTCTGTTTGGAGAGATTAGGAAAGAACAGCTGCTTTCTAATGGGA
GGGAGGCCCTTACCATCAATCAACTTCTGGCCGATGAAAACATGAAGAAACAGAACGACTATGTGGAGAGGTGCATCGAC
CTGAACCGGGCCATCCTGAAGCGAGAGCTGGGCCTGGCGGAGAAGGACATCATTGACATTCCGCAGCTCTTCTGCCTGGA
GCAGATTGTCAACGTCCCCTCCAACGAGCTGACCGGGAAGCTCTACGCAAGGCCCTACTTCCCTAACCTGCTGCAGATAA
TCGTGATGGGCCAGAACCTGGGCATCCCCAAGCCCTTCGGGCCCCAGATCAACGGCGCCTGCTGCCTGGAGGAAAAGATC
TACGAGTTGCTGGAGCCCCTGGGCTTCCAATGCACCTTCATTAACGACTTTGACTGCTACCTGACGGAAATCGGAGACTT
CTGCTCCTGTGCCAACATCCGCCGGGTGCCCTTTGCCTTCAAATGGTGGAAGATGGTGCCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 0 .00 RPM |
| SRP014902_testis | 0 .14 RPM |
| SRP018288_heart | 0 .00 RPM |
| SRP018288_kidney | 0 .00 RPM |
| SRP018288_liver | 0 .00 RPM |
| SRP018288_lung | 0 .31 RPM |
| SRP018856_adipose | 0 .05 RPM |
| SRP035408_brain | 0 .13 RPM |
| SRP035408_liver | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007733 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_1118 | 65.75 | 72.34 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000003484 retrocopies