Parental gene:

ZDHHC7, ENSSSCG00000002667

Aliases:None
Description:zinc finger, DHHC-type containing 7 [Source:HGNC Symbol;Acc:18459]
Organism:Pig (Sus scrofa)
Coordinates:6:4215555..4232617(-)


>ENSSSCG00000002667
ATGCCGTCACCGGGACACCGGCTCCGGGATGTCGAGCACCACCCTCTGCTGAGCGAAAGTGACGCCTACGACTCCGCGCC
GTCCTCGTCCTCCGAGGCCGACGGGGCGGACAGGGTCTGGTTCATCCGCGACGGCTGCGGCGTGGTCTGTGCCGTCCTGA
CGTGGCTCCTGGTGGTGTACGCCGACTTCGTGGTGACCTTCGTCATGCTGCTGCCGTCCAAGGACTTCTGGTACGCCGTG
CTCAACGGCGTCTCCTTCAACTGCCTGGCGGTGCTGGCCCTGTCCTCTCACCTGAGGACCATGCTCACCGACCCCGGGGC
GGTACCCAAAGGAAACGCCACAAAGGAATTCATGGAGAGCTTGCAGCTGAAGCCTGGAGAGGTGATCTACAAGTGCCCCA
AGTGCTGCTGCATCAAGCCCGAGCGTGCCCACCACTGCAGTATTTGCAAAAGATGCATTCGGAAAATGGATCATCACTGC
CCCTGGGTGAACAACTGCGTGGGGGAGAAGAATCAGAGGTTTTTTGTGCTCTTCACTATGTACATCGCTCTGGCCTCGGT
GCACGCGCTCGTCCTCTGCGGGCTCCAGTTCATCTCCTGTGTCCGAGGGCAGTGGACTGAGTGCAGTGGTTTCTCGCCGC
CAGTGACGGTGATCCTGCTCATCTTCCTGTGCCTTGAGGGGCTCCTGTTTTTCACGTTCACCGCCGTCATGTTCGGCACC
CAGATCCACTCCATATGCAACGACGAGACGGAGATCGAGAGGCTCAAGAGTGAGAAGCCCACCTGGGAGCGGAGGCTGCG
GTGGGAGGGGATGAAGTCTGTCTTTGGGGGGCCCCCTTCGCTGCTCTGGATGAACCCCTTCGTTGGCTTCCGACTGCGGC
GCCTGCAGACGAGACCCAGGAAAGGGGGCCCCGAGTTCTCGGTGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 74 .06 RPM
SRP014902_testis 67 .19 RPM
SRP018288_heart 18 .13 RPM
SRP018288_kidney 98 .11 RPM
SRP018288_liver 22 .23 RPM
SRP018288_lung 83 .50 RPM
SRP018856_adipose 56 .58 RPM
SRP035408_brain 24 .07 RPM
SRP035408_liver 22 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004119 ortholog_one2one 1 retrogene
retro_cjac_1437,
Echinops telfairi ENSETEG00000016077 ortholog_one2one 1 retrogene
retro_etel_1105,
Microcebus murinus ENSMICG00000011194 ortholog_one2one 1 retrogene
retro_mmur_1362,
Macaca mulatta ENSMMUG00000020674 ortholog_one2one 1 retrogene
retro_mmul_1448,
Sus scrofa ENSSSCG00000005658 other_paralog 1 retrogene
retro_sscr_250,
Tursiops truncatus ENSTTRG00000016028 ortholog_one2one 1 retrogene
retro_ttru_363,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_267 60.87 65.58
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Download FASTA sequences of all ENSSSCG00000002667 retrocopies