Parental gene:

ENSRNOG00000048441

Aliases:None
Description:None
Organism:Rat (Rattus norvegicus)
Coordinates:8:114231116..114247514(+)


>ENSRNOG00000048441
ATGAAGCTGACCGACAGCGTGCTGAGGAGCTTCCGCGTCGCCAAGGTGTTCCGCGAGAACTCGGACAAGATCAACTGCTT
TGACTTCAGTCCCAATGGGGAGACGGTCATCTCCAGTAGCGATGATGACTCCATCGTGCTCTATGACTGCCAGGAGGGCA
AGTGGATGATGGTGGTTATTTCGTGTGCCTTTGGTCTCTTCCGAGCGCGCGACACTCAAGCTGCTGAGAGTCTGGTCTTT
TCAAAAGTGAAAATGCAACATACTATTCGTTACTTGTCCTTGCATGACAATAAATACATCAGATACTTTCCTGGACACAG
CAAGAGGGTGGTGGCCTTGTCCATGTCACCTGTGGATGACACTTTCATTTCTGGGTCTCTTGATAAGACCATTCGACTCT
GGGATCTCCGGTCTCCTAACTGCCAGGGCCTCATGCATCTACAGGGCAAACCCGTTTGTTCCTTTGATCCAGAAGGGTTA
ATTTTTGCTGCAGGTGTCAACTCAGAAATGGTCAAACTTTATGACCTTCGTTCTTTTGATAAGGGTCCATTTGCTACCTT
TAAGATGCAGTATGATCGGACTTGTGAGTGGACAGGACTTAAGTTCAGCAACGATGGCAAACTGATACTCATCTCCACCA
ACGGCAGCTTCATCCGCCTCATTGACGCATTTAAGGGTGTGGTGATGCACACATTTGGGGGTTATGCTAATAGCAAAGCT
GTTACACTCGAAGCTTCTTTTACTCCAGATTCACAGTTTATTATGATTGGTTCAGAAGATGGCAAAATCCATGTGTGGAA
TGGGGAGAGCGGTATAAAGGTAGCTGTACTGGATGGGAAGCACACCGGCCCCATCACCTGTTTGCAGTTCAACCCCAAGT
TTATGACCTTTGCCAGCGCCTGTTCCAACATGGCCTTCTGGTTACCCACCATTGATGACTGA

Library Parental gene expression (RPM)
SRP017611_brain 26 .53 RPM
SRP017611_kidney 16 .96 RPM
SRP017611_liver 11 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000774 ortholog_one2many 1 retrogene
retro_chof_2299,
Callithrix jacchus ENSCJAG00000006114 ortholog_one2many 1 retrogene
retro_cjac_3022,
Homo sapiens ENSG00000164091 ortholog_one2many 2 retrogenes
retro_hsap_2816, retro_hsap_419,
Loxodonta africana ENSLAFG00000028309 ortholog_one2many 1 retrogene
retro_lafr_639,
Macropus eugenii ENSMEUG00000009280 ortholog_one2many 1 retrogene
retro_meug_1207,
Macaca mulatta ENSMMUG00000008234 ortholog_many2many 2 retrogenes
retro_mmul_339, retro_mmul_511,
Monodelphis domestica ENSMODG00000011614 ortholog_many2many 4 retrogenes
retro_mdom_1259, retro_mdom_144, retro_mdom_219, retro_mdom_398,
Nomascus leucogenys ENSNLEG00000007104 ortholog_one2many 2 retrogenes
retro_nleu_1016, retro_nleu_1195,
Otolemur garnettii ENSOGAG00000016032 ortholog_one2many 1 retrogene
retro_ogar_1314,
Pongo abelii ENSPPYG00000013812 ortholog_many2many 2 retrogenes
retro_pabe_185, retro_pabe_300,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1003 86.52 90.10
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_rnor_1109 83.16 90.10
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_rnor_1152 83.51 90.10
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000048441 retrocopies