Parental gene:

Tdg, ENSRNOG00000027124

Aliases:None
Description:G/T mismatch-specific thymine DNA glycosylase [Source:RefSeq peptide;Acc:NP_446181]
Organism:Rat (Rattus norvegicus)
Coordinates:7:27313357..27333042(-)


>ENSRNOG00000027124
ATGATGGCGGAGGCTCCGAACATGGCAGACGTGGCCGGACAGCAGATGCCTGCAGAAGCTCCTGCCCAGGATCCTGTGCC
AGAGGCTCCAAAGAGAAGGAAAAGGAAAACCAGGGCAGCAGAGGCCCAGGACCCAGTGGAGCCCAAAAAGCCTGCTGCCT
CAAAGAAATCTGGCAAGTCCACAAAATCAAAAGAAAAGCAAGAGAAAATCACAGACACCTTTAAAGTGAAAAGGAAAGTG
GACCGGTTCAACGGTGTCTCTGAAGCTGAGCTTCTGACCAAGACTCTCCCTGACATTTTGACCTTCAATCTGGATATTGT
AATTATTGGCATCAACCCAGGATTAATGGCCGCTTACAAAGGGCATCATTACCCTGGGCCCGGAAATCACTTCTGGAAGT
GTCTGTTCATGTCTGGGTTGAGCGAGGTGCAGCTGAATCACATGGATGACCACACCTTACCTGGAAAATACGGCATCGGA
TTCACCAACATGGTGGAACGGACAACGCCAGGCAGCAAGGATCTGTCTAGTAAAGAATTCCGGGAAGGAGGGCGTATCCT
AGTGCAGAAACTACAGAAATATCAGCCACGAATAGCGGTGTTTAATGGAAAATGTATTTATGAGATTTTCAGTAAAGAAG
TTTTTGGAGTAAAGGTTAAGAACTTGGAATTTGGGCTTCAACCGCACAAGATCCCAGACACAGAAACTCTCTGCTACGTC
ATGCCGTCCTCCAGTGCCCGGTGCGCTCAGTTCCCTCGGGCGCAGGACAAAGTCCATTACTACATTAAGCTGAAGGACTT
GCGAGACCAGCTGAAGGGCATCGAGCGCAGCACGGACGTTCAGGAGGTGCAGTACACGTTCGACCTGCAGCTCGCACAAG
AGGACGCAAAGAGGACGGCTGTTAAGGAAGAAAAGTATGACCCAGGCTATGAGGCAGCGTATGGCGGTGCCTGTGGTGAA
AACCCGTGTAATGGGGAACCTTGTGGCTTTGCTTCAAATGGGCTAACAGCCAACAGTGCGGAGCTGGGAGGAGAATCAGC
TCCGAGCGACGTTCCAAACGGGCAGTGGATGGCGCAGTCGTTTGCAGAGCAGATCCCTTCTTTCAATAATTGTGGCACAG
GAGAGCAGGAAGCAGGAAGCCATGCAGGAAGCCATGCTTAG

Library Parental gene expression (RPM)
SRP017611_brain 33 .29 RPM
SRP017611_kidney 32 .10 RPM
SRP017611_liver 19 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000013722 ortholog_one2many 1 retrogene
retro_dnov_1749,
Echinops telfairi ENSETEG00000019930 ortholog_many2many 1 retrogene
retro_etel_2184,
Homo sapiens ENSG00000139372 ortholog_one2many 1 retrogene
retro_hsap_980,
Loxodonta africana ENSLAFG00000003813 ortholog_one2many 1 retrogene
retro_lafr_460,
Mus musculus ENSMUSG00000034674 ortholog_one2many 4 retrogenes
retro_mmus_1125, retro_mmus_1363, retro_mmus_3040, retro_mmus_637,
Oryctolagus cuniculus ENSOCUG00000016313 ortholog_one2many 1 retrogene
retro_ocun_1289,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2286 75.94 68.39
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Download FASTA sequences of all ENSRNOG00000027124 retrocopies