Parental gene: | Eef1e1, ENSRNOG00000016390 |
| Aliases: | None |
| Description: | eukaryotic translation elongation factor 1 epsilon-1 [Source:RefSeq peptide;Acc:NP_001099576] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 17:28701068..28713201(+) |
>ENSRNOG00000016390
ATGGCGGCAGCCGCCGAGCTGAGGCTTCTGGAGAAGAGTCTGGGACTGAAGCCGGGGAATAAGTACAGCGCTCAGGGCGA
ACGACAGGTTCCAGTCCTACAAACAAACAATGGCCCCAGTCTAATGGGATTGAGCACCATTGCGACCCATCTGGTCAAGG
AGGCCAACAAGGAGCACTTGCTGGGGAGCACTGCAGAAGAAAAGGCACTAGTTCAGCAGTGGTTAGAGTTCAGGATCACT
CGAGTAGATGGACACTCCAGTAAAGAAGACACCCAGACTCTGCTGAAGGATCTCAACTCCTATCTGGAAGACAAAGTCTA
CCTTGCAGGACATAACACTACCCTGGCGGACATCCTCCTGTACTACGGGCTCCACCGCTTTATAGTTGACCTGACAGTTC
AAGAAAAGGAGAAATATCTCAATGTGTCTCGCTGGTTTTGCCACATTCAACATTACCCAGACATCAGGCAGCATCTGTCT
AGTGTTGTCTTCATCAAGAACAGACTCTATGCCAACTCCCACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 21 .28 RPM |
| SRP017611_kidney | 21 .49 RPM |
| SRP017611_liver | 7 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017318 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000019203 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000006156 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000011622 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000008960 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000012636 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007715 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000588 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000012305 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_785 | 87.07 | 66.09 | Please wait, loading  |
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| 2. | retro_rnor_1682 | 86.33 | 78.74 | Please wait, loading |
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| 3. | retro_rnor_2013 | 86.24 | 60.92 | Please wait, loading |
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| 4. | retro_rnor_2132 | 78.86 | 100.00 | Please wait, loading |
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| 5. | retro_rnor_2133 | 78.86 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSRNOG00000016390 retrocopies