Parental gene:

Rnf149, ENSRNOG00000013946

Aliases:None
Description:Protein Rnf149 [Source:UniProtKB/TrEMBL;Acc:D3ZI66]
Organism:Rat (Rattus norvegicus)
Coordinates:9:45974157..45998057(-)


>ENSRNOG00000013946
ATGGCGGCGCGGCGGCGGCCCGCGGCTGGCGTGGGAGCCCGGGACGCGCTCGCGGTGCTTGCGCTGGCCTTGTGTGCTCC
CGGGGTGGGCGGCGGGGCACTCGAGTGGTACTCCGCCACGGTGAGCATCGAGTACGTGGACCCGCAGTCGAACCTGACGG
TGTGGAGCGTGACCGAGAGCGGCCGCTTCGGCGACAGCTCGCTCAGGGAGGAGAGGCAGGGCCTGGTGGGCGTCCCGCGC
GCTCCCGCGGATGCGGAGGGCTGCGCGCCCGACACGCGCTTCGTGGCGCCCGGCGCCCTCGGCAACGCGCCCTGGGTGGC
GCTGGTGGCGCGAGGCGGCTGCACCTTCAAGGACAAGGTGCTGGCGGCGGCGCGGAGGAACGCCTCGGCCGTGGTGGTCT
ACAACCAGGAGCGCTACGGGAACGCCACCGAGCCCATGTCCCACGCGGGAACAGGCAGCATAGTCGTCATCATGATTAGC
TACCCAAAAGGACGGGAGATTTCTGATCTGGTGCAAAAAGGAATTCCAGTAAAAATGAGGATAGAGATTGGTACTCGTCA
TATGCAGGAGTTCATCAGCGGTCAGTCTGTGGTGTTTGTGGCCATTGCCTTCATCACGATGATGATTATCTCATTAGCAT
GGCTAATATTCTATTATATACAGCGTTTCCTATATACTGGCTCACAGTTTGGAAGTCAGAATCATAGAAAGGAAACTAAG
AAGGTTATTGGCCAGCTTCCACTACACACTGTGAAGCATGGAGAGAAGGGAATCGATGTTGATGCTGAGAATTGTGCAGT
GTGTATTGAAAACTTTAAAGTCAAAGATGTTATCAGAATCCTGCCATGCAAGCATATTTTTCATAGAATATGCATTGACC
CATGGCTTTTGGATCACCGAACGTGTCCAATGTGTAAACTTGATGTCATCAAAGCCCTGGGATATTGGGGGGACCCTGAA
GATGCACAGGACCTACCCATCCCAGAAGCTGCCCCAGGAAGTGTTTCTGTTGGGAATCTGAGTGTGACAGTCCAAGATGA
GGAGAGGAGTGAAAGCAACCTTCCATCATCTTCCTCAAGCGAGTTTGGGCCACACCGCCCTTGTCTTAAAGAAGATGCAG
AGGAGGACACAGCATTGCTAGGAGCCGGCAGGAGTGACCCTCAGCATGGAGGATCCATCTGCTAG

Library Parental gene expression (RPM)
SRP017611_brain 29 .48 RPM
SRP017611_kidney 54 .50 RPM
SRP017611_liver 64 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012057 ortholog_one2one 2 retrogenes
retro_chof_290, retro_chof_555,
Dasypus novemcinctus ENSDNOG00000011956 ortholog_one2one 3 retrogenes
retro_dnov_2168, retro_dnov_534, retro_dnov_580,
Macropus eugenii ENSMEUG00000014821 ortholog_one2one 1 retrogene
retro_meug_417,
Myotis lucifugus ENSMLUG00000007110 ortholog_one2one 1 retrogene
retro_mluc_1684,
Tursiops truncatus ENSTTRG00000016450 ortholog_one2one 1 retrogene
retro_ttru_351,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1406 88.28 64.97
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2. retro_rnor_2527 79.41 50.76
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Download FASTA sequences of all ENSRNOG00000013946 retrocopies