Parental gene:

Uba3, ENSRNOG00000006221

Aliases:Uba3, Ube1c
Description:NEDD8-activating enzyme E1 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q99MI7]
Organism:Rat (Rattus norvegicus)
Coordinates:4:194051848..194072884(-)


>ENSRNOG00000006221
ATGGCGGATGGCGAGGAGCCGGAGAAGAAAAGAAGGAGAATAGAGGAGCTGCTGGCTGAGAGAATGGCTGTTGATGGTGG
GTGTGGGGACACTGGAGACTGGGAAGGTCGCTGGAACCATGTAAAGAAGTTCCTCGAGCGGTCCGGACCCTTCACACACC
CTGATTTCGAACCGAGCACTGAATCACTCCAGTTCTTGTTAGATACATGTAAAGTTCTAGTCATTGGAGCTGGTGGCTTA
GGATGTGAGCTACTGAAAAATCTGGCATTGTCTGGTTTTAGACAGATTCATGTTATAGACATGGACACTATAGATGTTTC
CAATTTAAATAGGCAGTTTTTATTTAGGCCTAAAGATGTTGGAAGACCCAAGGCTGAAGTTGCTGCAGAATTCCTGAATG
ACAGAGTTCCTAACTGCAACGTGGTCCCACATTTCAACAAGATTCAAGATTTTAACGACACTTTCTACCGACAATTTCAT
ATTATCGTATGTGGCCTGGACTCTATCATAGCCAGGAGATGGATCAATGGAATGCTGATATCTCTTCTAAATTATGAAGA
TGGTGTGTTGGATCCAAGCTCCATCGTACCTTTGATAGATGGGGGCACAGAAGGCTTTAAAGGGAATGCCCGAGTGATTT
TGCCTGGAATGACCGCTTGTATTGAGTGCACTCTGGAACTTTACCCACCACAGGTCAATTTCCCCATGTGTACCATTGCA
TCTATGCCCAGGCTCCCAGAGCACTGTATCGAGTATGTAAGGATGTTGCAGTGGCCTAAAGAGCAGCCTTTTGGAGATGG
GGTTCCATTAGACGGAGATGACCCTGAACATATTCAGTGGATTTTCCAAAAGTCTGTAGAGAGAGCATCACAATATAATA
TTAGAGGTGTTACCTACAGACTCACTCAAGGGGTAGTAAAACGAATCATTCCCGCAGTAGCTTCTACAAATGCAGTCATT
GCAGCTGTGTGTGCCACTGAGGTTTTCAAGATAGCTACAAGTGCGTACATTCCCCTTAATAATTACTTAGTATTCAATGA
TGTAGATGGACTGTACACTTACACATTTGAAGCAGAGAGAAAGGAGAACTGCCCTGCGTGTAGCCAGCTTCCTCAAAACA
TCCAGTTCTCCCCATCAGCTAAACTGCAAGAGGTGTTAGACTATCTAACCAATAGTGCTTCTCTGCAAATGAAGTCTCCA
GCTATTACAGCCACATTAGAGGGGAAAAACAGGACACTTTATTTACAGTCAGTAACGTCTATTGAAGAACGAACGAGACC
GAATCTTTCCAAAACATTAAAAGAACTGGGACTAGTTGATGGACAAGAACTGGCTGTTGCTGACGTCACCACACCACAAA
CTGTACTATTCAAACTTCATTTTACTTAA

Library Parental gene expression (RPM)
SRP017611_brain 42 .78 RPM
SRP017611_kidney 37 .75 RPM
SRP017611_liver 17 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010117 ortholog_one2one 1 retrogene
retro_amel_204,
Choloepus hoffmanni ENSCHOG00000013626 ortholog_one2one 2 retrogenes
retro_chof_1740, retro_chof_553,
Callithrix jacchus ENSCJAG00000013395 ortholog_one2one 2 retrogenes
retro_cjac_2827, retro_cjac_2986,
Erinaceus europaeus ENSEEUG00000005430 ortholog_one2one 2 retrogenes
retro_eeur_374, retro_eeur_663,
Otolemur garnettii ENSOGAG00000007771 ortholog_one2one 2 retrogenes
retro_ogar_1868, retro_ogar_2776,
Sus scrofa ENSSSCG00000011506 ortholog_one2one 1 retrogene
retro_sscr_192,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_852 92.90 100.00
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Download FASTA sequences of all ENSRNOG00000006221 retrocopies