Parental gene:

Mrpl13, ENSRNOG00000004401

Aliases:None
Description:39S ribosomal protein L13, mitochondrial [Source:RefSeq peptide;Acc:NP_001006986]
Organism:Rat (Rattus norvegicus)
Coordinates:7:95910453..95932053(-)


>ENSRNOG00000004401
ATGTCTAGCTTCTCAAAGGCGCCCCAGCAATGGGCCACTTTTGCTCGAATGTGGTATCTCTTGGATGGCAAAATGCAGCC
CCCTGGCAAACTTGCGGCCATAGCATCCAATAAACTTCAGGGGTTACATAAACCAGTGTACCATCAGCTGAGTGATTGTG
GAGACCATGTTGTCATAATAAACACAAGACATATTGCATTTTCTGGAAACAAATGGGAACAAAAAGTGTACTCCTCACAT
ACTGGCTACCCGGGTGGCTTCAGACAGGTAACAGCTGCACAGCTCCACCTGAAAGACCCAGTGGCGATTGTGAAGTTAGC
TACTTATGGCATGCTGCCCAAAAACCTGCACAGAAGAACGATGATGCAAAGGCTGCATCTTTTTCCTGATGAGGATATTC
CAGAAGATATTCTTAAGAATTTAGTGGAAGAGCTTCCTCAGCCACGGAGAGTGCCTAAGCGGCTGGACGAGTACACCCAA
GAAGAAATAGAGGCTTTCCCGAGAGTGTGGGCCCCACCTGATGATTTTCGGATATAG

Library Parental gene expression (RPM)
SRP017611_brain 17 .18 RPM
SRP017611_kidney 21 .84 RPM
SRP017611_liver 10 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006926 ortholog_one2one 1 retrogene
retro_chof_648,
Callithrix jacchus ENSCJAG00000005359 ortholog_one2many 1 retrogene
retro_cjac_162,
Dipodomys ordii ENSDORG00000016654 ortholog_one2one 1 retrogene
retro_dord_480,
Equus caballus ENSECAG00000021161 ortholog_one2one 1 retrogene
retro_ecab_952,
Mustela putorius furo ENSMPUG00000001080 ortholog_one2one 2 retrogenes
retro_mputfur_1585, retro_mputfur_623,
Oryctolagus cuniculus ENSOCUG00000016189 ortholog_one2one 1 retrogene
retro_ocun_675,
Ochotona princeps ENSOPRG00000015721 ortholog_one2one 2 retrogenes
retro_opri_274, retro_opri_454,
Pteropus vampyrus ENSPVAG00000003719 ortholog_one2one 1 retrogene
retro_pvam_627,
Sus scrofa ENSSSCG00000005996 ortholog_one2one 1 retrogene
retro_sscr_1183,
Tupaia belangeri ENSTBEG00000004571 ortholog_one2one 5 retrogenes
retro_tbel_1026, retro_tbel_1596, retro_tbel_2517, retro_tbel_3095, retro_tbel_456,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2720 80.34 98.31
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Download FASTA sequences of all ENSRNOG00000004401 retrocopies