Parental gene:

NUP35, ENSPTRG00000012711

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:187683669..187721666(+)


>ENSPTRG00000012711
ATGGCAGCCTTTGCAGTGGAACCTCAGGGGCCCGCGTTAGGATCTGAACCAATGATGCTGGGTTCACCCACATCTCCAAA
GCCAGGAGTTAATGCCCAGTTCTTACCTGGATTTTTAATGGGGGATTTGCCAGCTCCGGTGACTCCACAACCTCGATCAA
TTAGTGGCCCTTCAGTAGGAGTAATGGAAATGAGATCACCTTTACTTGCAGGTGGGTCACCACCACAACCAGTTGTACCA
GCTCATAAAGATAAAAGTGGCGCTCCACCAGTTAGAAGTATATATGATGACATTTCTAGCCCAGGACTTGGATCAACACC
TTTAACTTCAAGAAGACAGCCAAACATTTCAGTAATGCAGAGCCCTCTTGTTGGAGTTACATCTACTCCTGGAACAGGGC
AAAGTATGTTTAGTCCAGCAAGTATCGGTCAGCCACGAAAGACGACATTATCTCCTGCCCAGTTGGATCCTTTTTATACT
CAAGGAGATTCTTTGACTTCAGAAGATCACCTCGATGACTCTTGGGTGACTGTATTTGGGTTTCCTCAAGCATCTGCTTC
CTACATATTACTACAATTTGCACAGTATGGGAATATCTTAAAACATGTGATGTCTAATACAGGAAATTGGATGCATATTC
GTTATCAATCTAAACTGCAGGCTCGGAAGGCCTTAAGCAAAGATGGGAGGATTTTTGGAGAATCCATCATGATTGGTGTA
AAACCATGTATTGACAAAAGTGTTATGGAAAGCAGTGACAGATGTGCTTTATCATCTCCATCTTTAGCCTTTACACCACC
AATCAAAACTCTAGGTACACCAACACAACCTGGAAGTACTCCTAGGATTTCTACCATGAGACCTCTTGCTACAGCATACA
AAGCCTCTACTAGTGATTATCAGGTTATTTCTGACAGACAAACGCCAAAAAAAGATGAAAGTCTTGTATCCAAAGCAATG
GAGTACATGTTTGGCTGGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .22 RPM
SRP007412_cerebellum 5 .81 RPM
SRP007412_heart 2 .65 RPM
SRP007412_kidney 7 .43 RPM
SRP007412_liver 4 .35 RPM
SRP007412_testis 22 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000008469 ortholog_one2one 1 retrogene
retro_eeur_666,
Homo sapiens ENSG00000163002 ortholog_one2one 1 retrogene
retro_hsap_551,
Gorilla gorilla ENSGGOG00000009919 ortholog_one2one 1 retrogene
retro_ggor_500,
Macaca mulatta ENSMMUG00000004140 ortholog_one2one 1 retrogene
retro_mmul_2387,
Nomascus leucogenys ENSNLEG00000006423 ortholog_one2one 1 retrogene
retro_nleu_2019,
Pongo abelii ENSPPYG00000012998 ortholog_one2one 1 retrogene
retro_pabe_508,
Ictidomys tridecemlineatus ENSSTOG00000000711 ortholog_one2one 2 retrogenes
retro_itri_755, retro_itri_760,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_414 84.04 93.87
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Download FASTA sequences of all ENSPTRG00000012711 retrocopies